Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3136 ATGGCACACAACACATCCCATCTCAACGTGCAGCAATCCTTCGAGTCCTTCTTCCAAGGCTGGCTTCTACGCCAACAGAACTTCCTCGAGCAGCTTCTGAGTATCTCCCTCACACCCGATTCTCCCCTCAAAATCCACCATCAGAATGCCCTAATTGACCAAGTCCTCTCTCACTACCACCAATACTTCCTCCAGAAATCCAGACTCGCCGACGCCGATGTCTTCCTCCTCTTTTCCCCTACCTGGCTCTCTTCTTACGAGCGAGCTCTCCTCTGGATCGCCGATTACAAACCTTCCTTGCTCCTCCGTCTCGTCGACGGCGCCGTCCAGGGTTTGACGCCGGACCAGGACCAGGACCTGCACCAGCTCAAGGAAGATACCAGGAGAGAGGAGAGGATCCTCACCGGAATAATGGCCGCCGTTCAAGAGAGCCTCGCGGGTCCCTCTATACTGCAAGTGGCGAGGCAGGTGGGGAGGCTGCTCGACGGGGAGATTGGGGAGCTGGATTCCGCAATGGAGGTGATGAAGAGGGCAATGACGGAGGTATTGGAGAAGGCGGACCAGCTGCGAGTCACGACGGCGAAGAGGGTGGTGGAAATTTTGAGTCCGTCGCAGACGGTGCAGTTtctggcggcggcggcggagtTTCAGCTTCGCGTGAGGAGGTGGGGGATGGAGAGGGACTCTCGCGGTCGTCAAGAACATAGATGA 711 0.5513 MAHNTSHLNVQQSFESFFQGWLLRQQNFLEQLLSISLTPDSPLKIHHQNALIDQVLSHYHQYFLQKSRLADADVFLLFSPTWLSSYERALLWIADYKPSLLLRLVDGAVQGLTPDQDQDLHQLKEDTRREERILTGIMAAVQESLAGPSILQVARQVGRLLDGEIGELDSAMEVMKRAMTEVLEKADQLRVTTAKRVVEILSPSQTVQFLAAAAEFQLRVRRWGMERDSRGRQEHR 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3136 236 ProSiteProfiles DOG1 domain profile. 11 230 IPR025422 GO:0006351|GO:0043565
Sto9g3136 236 PANTHER - 4 231 - -
Sto9g3136 236 PANTHER TRANSCRIPTION FACTOR HBP-1B 4 231 - -
Sto9g3136 236 Pfam Seed dormancy control 48 105 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3136 Sto-Chr9 31992903 31994158 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3136 50 221 Calmodulin-binding Proteins AT5G65210 32.948 1.32e-19 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3136 - - aprc:113865861 259.225