Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3123 ATGGTGGTGAGGAAAGTGGGCAAATATGAAATTGGGAGGACTATTGGAGAAGGAACCTTTGCCAAGGTCAAATTCGCTCAAAACACTGAGACTGGCGAGAGTGTCGCCATGAAAGTGCTCGACCGTAGCACCATCATCAAGCACAAGATGGTCGATCAGATCAAGAGGGAGATTTCTATCATGAAGCTAGTTCGACATCCTTATGTTGTTCTGGCAAGCCGTACTAAGATTTATATCATATTGGAGTTTATTACAGGTGGTGAAttgtttgataaaattGTACATCATGGGCGTCTTAGTGAAGCTGAATGTAGAAGATACTTCCAACAGCTTATTGATGGTGTAGATTATTGCCACAGTAAAGGAGTTTATCACAGAGATTTGAAGCCTGAAAATCTATTACTTGATTCTCAAGGAAATATAAAGATCTCAGATTTTGGTCTGAGTGCATTGCCGGAACAGGGTGTTAGTATCCTGCGGACAACTTGTGGGACTCCAAATTATGTAGCCCCTGAGGTACTTAGTCACAAGGGTTACAATGGTGCCGTGGCAGATGTTTGGTCCTGTGGGGTTATCCTCTATATTGAGAGAGCAGATTTTTCATGCCCTCAGTGGTTTCCTGTGGGAGCAAAAGCTTTAATACATAGAATTCTGGACCCAAATCCGGAAACTCGAATAACTATTCAACAGATCAGAAGAGATGAGTGGTTTCAGAAGAACTATGTTCCTGTCAGTCTTCTTGAGTATGAAGATGTAAATCTGGACGATGTAAATGCTGcttttgatgatgatgagGATGAGAGGATTAATCAACAATGTGAGAATGAGGATCGTGGCCCGTTAATGCTTAATGCGTTTGACTTGATAATTCTATCTCAAGGCTTAAATCTCGCCACAATTTTCGACCGTGGACAGGACTCTATGAAGCACCAAACTCGCTTTATCTCTCAGAAGCCAGCAAAGGTGGTTTTATCAAGTATGGAAGTTGTGGCACAATCAATGGGATTTAAAACACATATTCGCAACTACAAGATGAGAGTAGAGGGTACTTCAGCCGATAAAACTTCTTTTTTCTCGGTTATCCTGGAAGTTTTTGCAGTTGATCCCACATTTTTCATGGTGGACATTCAAAAAGCAGCTGGAGATGCAGGTGAATACCTCAAGTTTTACAAGAATTTTTGTAGCAACCTTGATGATATAATCTGGAAACCGCCTTATGAAACAAGCAAATCTAGGACCTCCAAGACTACTAAAAGCAGAAGACGATCGTTTCACATCTGA 1281 0.4044 MVVRKVGKYEIGRTIGEGTFAKVKFAQNTETGESVAMKVLDRSTIIKHKMVDQIKREISIMKLVRHPYVVLASRTKIYIILEFITGGELFDKIVHHGRLSEAECRRYFQQLIDGVDYCHSKGVYHRDLKPENLLLDSQGNIKISDFGLSALPEQGVSILRTTCGTPNYVAPEVLSHKGYNGAVADVWSCGVILYIERADFSCPQWFPVGAKALIHRILDPNPETRITIQQIRRDEWFQKNYVPVSLLEYEDVNLDDVNAAFDDDEDERINQQCENEDRGPLMLNAFDLIILSQGLNLATIFDRGQDSMKHQTRFISQKPAKVVLSSMEVVAQSMGFKTHIRNYKMRVEGTSADKTSFFSVILEVFAVDPTFFMVDIQKAAGDAGEYLKFYKNFCSNLDDIIWKPPYETSKSRTSKTTKSRRRSFHI 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3123 426 ProSitePatterns Protein kinases ATP-binding region signature. 15 47 IPR017441 GO:0005524
Sto9g3123 426 PANTHER - 2 418 - -
Sto9g3123 426 Pfam Protein kinase domain 9 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3123 426 Gene3D Transferase(Phosphotransferase) domain 1 3 281 - -
Sto9g3123 426 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 418 - -
Sto9g3123 426 Gene3D Kinase associated domain 1, KA1 282 403 - -
Sto9g3123 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Sto9g3123 426 CDD CIPK_C 284 399 - -
Sto9g3123 426 Pfam NAF domain 280 338 IPR004041 GO:0007165
Sto9g3123 426 Coils Coil 426 426 - -
Sto9g3123 426 SUPERFAMILY Protein kinase-like (PK-like) 6 253 IPR011009 -
Sto9g3123 426 ProSiteProfiles NAF domain profile. 278 302 IPR018451 GO:0007165
Sto9g3123 426 ProSiteProfiles Protein kinase domain profile. 9 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3123 426 SMART serkin_6 9 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3123 Sto-Chr9 31873064 31878048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3123 1 363 CBL-interacting serine-threonine protein kinases AT4G24400 79.124 0.0 624
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Sto9g3123 Pkinase 1.8e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3123 - - gmx:100813117 734.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3123 9 31873064 31878048 Sto9g3123 9 31873064 31878048 ECH