Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3117 ATGTTAAGGCAACAGTTGCAGAACTTGCAAGAAAGTCACCGGCAAATGATGGGAGAAGAACTTTCAAGTATGAATGTAAAGGAATTACAAAGTTTGGAAAACAAACTGGAAATTAGCCTTCGGGGTGTCCGTATGAAAAAGGATCAACTCTTAATGGATGAAATACAGGAACTAAACCGAAAGGGAAACATTATACACCAAGAAAATGTGGAACTGTATAAGAAGGTAAACCTTATTCGTCAAGAAAACATTCTATTTAGAAAAAAGGTCTATGAAGCAAGAGATGAAAATGGAGCAAACAGAAATTCTGTTCTCACAAATGGTCTAGGAATAGGAGAGGACTTGCAGGTGCCTGTAAATCTCCAACTCAGCCAGCCACAGCAACAAAACTACGAGACTCCTGCAGGAGCTACAAAATTGGGACAAAACTTGCATTATAGAAAGGATGTGTTACGTAGCCATGGCTAA 468 0.3889 MLRQQLQNLQESHRQMMGEELSSMNVKELQSLENKLEISLRGVRMKKDQLLMDEIQELNRKGNIIHQENVELYKKVNLIRQENILFRKKVYEARDENGANRNSVLTNGLGIGEDLQVPVNLQLSQPQQQNYETPAGATKLGQNLHYRKDVLRSHG 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3117 155 PANTHER MADS-BOX TRANSCRIPTION FACTOR 23 ISOFORM X1 1 146 - -
Sto9g3117 155 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 146 - -
Sto9g3117 155 ProSiteProfiles K-box domain profile. 1 82 IPR002487 GO:0003700|GO:0005634|GO:0006355
Sto9g3117 155 Pfam K-box region 2 76 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3117 Sto-Chr9 31845352 31847267 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3117 1 140 MADS-box Gene Family AT3G57230 57.857 2.49e-48 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3117 K09264 - gmx:100812413 231.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3117 9 31845352 31847267 Sto9g3117 9 31845352 31847267 ECH