Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3086 ATGGACGCGAACAGAATCGAAGCCGAGCGATTGCTTGGAATTGCCGAAAAGCTCTTGCAGAACCGAGATCTGAACGGCTCAAGGGACTTCGCTATTTTAGCCCAGGAAGCTGAACCCCTTTTGGAGGGTTCGGATCAGATCTTGGCTGTCATCGACGTGCTACTCGCAGCGGACAAACGCGTTAACAACCACCATGACTGGTACGGCATTCTTCAGGTGGATCGTCGATCTACCGACTTCGATTTAATCAAGAGGCAGTATCGTAGGCTCGCGCTTCTTCTCCACCCTGATAAGAACAGGTTTTCTCTCGCCGATCACGCTTTCAGGCTCGTCGCCGAGGCGTGGGCTGTGCTATCGGACCAGGTTAAGAAGTCAATTTACGACAAGGAGCTCGGCTTCTTCACTAGGGTCGACTTGAGCGTGCCCAGCTGGGTTCAACAAGACAAATTGCCGGTTCGTAGGGGCGGGCCTGGGCCCAGTGGACGGGATCAAGGGTTCGATCCGAGGAATGGTAACAACGCCGATAGGGACGAAGAAACGAATGAGAATCCACGGCGGAGATCGACTTTCTGGACGACATGTCCGTACTGTTACTACTTGTTCGAGTACCCTAAGATCTATGAGGGTTGTTGTTTGAGGTGCCAGAATTGCGAGAAGTCCTTCCATGGGGTTTCGCTTCCCTCTTTGCCGCCAATTGTGCCTGGACAAGATGCTTATCACTGTTGCTGGGGTTTCTTCCCAATGGGATTTTTCGTTGGAAATGCTGGTGGTAAGGGGGCTGCACCGCCACCCACGGAGGTCCCGAATTCGATGCCACCGCCTTCTGCAACTGTCCAGCCAGCAGAGAATGGTAGGTATAATGGGCAACCGGCAGCGTCGGCCCCTAAGGCCACAGCGCCAATTCCGCCGGCGGTTGTTTCGAATGGGGCTGCTTCAGGAGGGTCTTCTGGAAAGCGGAAGCGTGGAAGGCCCCGTAAAAATCCTTTATTGTCATGA 996 0.5392 MDANRIEAERLLGIAEKLLQNRDLNGSRDFAILAQEAEPLLEGSDQILAVIDVLLAADKRVNNHHDWYGILQVDRRSTDFDLIKRQYRRLALLLHPDKNRFSLADHAFRLVAEAWAVLSDQVKKSIYDKELGFFTRVDLSVPSWVQQDKLPVRRGGPGPSGRDQGFDPRNGNNADRDEETNENPRRRSTFWTTCPYCYYLFEYPKIYEGCCLRCQNCEKSFHGVSLPSLPPIVPGQDAYHCCWGFFPMGFFVGNAGGKGAAPPPTEVPNSMPPPSATVQPAENGRYNGQPAASAPKATAPIPPAVVSNGAASGGSSGKRKRGRPRKNPLLS 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3086 331 CDD DnaJ 66 120 IPR001623 -
Sto9g3086 331 Pfam DnaJ domain 66 128 IPR001623 -
Sto9g3086 331 MobiDBLite consensus disorder prediction 149 185 - -
Sto9g3086 331 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 327 - -
Sto9g3086 331 ProSiteProfiles dnaJ domain profile. 66 131 IPR001623 -
Sto9g3086 331 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 327 - -
Sto9g3086 331 Gene3D DnaJ domain 55 137 IPR036869 -
Sto9g3086 331 SUPERFAMILY Chaperone J-domain 59 131 IPR036869 -
Sto9g3086 331 MobiDBLite consensus disorder prediction 259 331 - -
Sto9g3086 331 SMART dnaj_3 65 123 IPR001623 -
Sto9g3086 331 MobiDBLite consensus disorder prediction 169 185 - -
Sto9g3086 331 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Sto9g3086 331 PRINTS DnaJ domain signature 68 86 IPR001623 -
Sto9g3086 331 PRINTS DnaJ domain signature 87 102 IPR001623 -
Sto9g3086 331 PRINTS DnaJ domain signature 103 123 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3086 Sto-Chr9 31612155 31613150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3086 4 329 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 49.854 2.85e-102 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3086 - - gmx:100816918 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3086 9 31612155 31613150 Sto9g3086 9 31612155 31613150 ECH