Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3081 atgATGAGACGTAGCAATGAAACTGCAATCATCAGTTCCACCGCGGAGGGCAAGAGGCCCAAGGGCCGCCCAaaaggctccaagaacaagccCAAGCCCGCTCTTCTTGCATCCTCAGTCTCTGTCTCTGACCACATGGCTCCCTACCTCCTCCAAGTCCCCCACGGCAACGACGTCGTTCAAGCCATTTCTCAATTCAGCCGCCGCAAGAACATTGGCATCTGTGTCCTTTCCGCTTCCGGCACCGTCTTCAACGCCGCCGTGCGTTCCTCCGCCGCCCTTCCCGCTCCCGACGTCACGTGCCCCGACCGTTACCTCATCCTCTCCATATCCGCCGCCTTCCTCCCTCACCAATCCCTCACTTCGCCCACCGCCCTCAAACCCCTCACCGTCTCACTCGTCGCTCCAAGCGGCCACGTCGTCGGAGGATTGGTCTCCGGCCAGTTGCTGGCGGCGGGGCCGGTGTTCGTCATAGCCACCTCCTTCAACAATCCAATCCATTACACGCTGCAGTCCAATGAAGAGGACGACGCGCAGAACACGGCCGTCGCAAGCGGAGGAGAAAGTGAGCACGCGCCGCCGCCGAATCCTCTATCTGATGGGATGGCTTTGTATTATAATCATCATGATAGCCTTCAACTGCCGTTCGCTCAATGGGCCTTGGGCTCCAATAATGGGTTTGGTTTTGGTGTGCTATTTGTTAATTAG 708 0.5636 MMRRSNETAIISSTAEGKRPKGRPKGSKNKPKPALLASSVSVSDHMAPYLLQVPHGNDVVQAISQFSRRKNIGICVLSASGTVFNAAVRSSAALPAPDVTCPDRYLILSISAAFLPHQSLTSPTALKPLTVSLVAPSGHVVGGLVSGQLLAAGPVFVIATSFNNPIHYTLQSNEEDDAQNTAVASGGESEHAPPPNPLSDGMALYYNHHDSLQLPFAQWALGSNNGFGFGVLFVN 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3081 235 MobiDBLite consensus disorder prediction 1 35 - -
Sto9g3081 235 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 12 196 - -
Sto9g3081 235 CDD DUF296 48 162 IPR005175 -
Sto9g3081 235 Gene3D - 48 179 - -
Sto9g3081 235 ProSiteProfiles PPC domain profile profile. 43 184 IPR005175 -
Sto9g3081 235 MobiDBLite consensus disorder prediction 176 200 - -
Sto9g3081 235 Pfam Plants and Prokaryotes Conserved (PCC) domain 48 164 IPR005175 -
Sto9g3081 235 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 12 196 IPR014476 GO:0003680
Sto9g3081 235 SUPERFAMILY AF0104/ALDC/Ptd012-like 45 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3081 Sto-Chr9 31581780 31582600 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3081 18 188 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 46.739 3.13e-45 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3081 - - gmx:100815772 169.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3081 9 31581780 31582600 Sto9g3081 9 31581780 31582600 ECH