Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3066 ATGGCACCCAGTTTCGATTGTGTTTCCAGTCTTCTCTGTGCAGAAGACAACCATATTTTTGATGATAACATTAACGACTATGGGGACCATCCTCTCCATACCCAGAACCATAACTTGTTCTTTCTTCGCCAAGACGGGTTGCCATTGCAGAGTGATGAGTGTGTAGCGCTTATGGTGAAAAAAGAATGCGACCACTTGCCTGCTGCAAATTACTTGAATAGACTTAGGACTGGGGATTTGGACTTTGGGGCTAGAAAGGAGGCCATTCATTGGATTGAACAGGTTCGAGCCCATTTCGGTTTCGGTCCACTCTGTGCATATCTATCCATAAACTACCTGGACCGCTTCCTTTCTGCATATGAATTACCAAAGGGAAAAGCCTGGACAATGCAATTGTTGGCTGTGGCATGCTTGTCACTCGCAGCCAAAATAGAAGAGACTGAAGTTCCCCCGTCTCTTGACTTACAGGTGGGTGAATCAAAGTTTGTATTTGAAGCGAGAACAATACAGAGAATGGAACTTCTAGTACTGAGCACACTGAGGTGGAGGATGCAAGCCATTACCCCTTTCTCCTTCATAGACTATTTCCTTTGCAAGATGAATGATGATGAGACTCCACGAGGAGAATTCATTTCGCGATCCATCCAAATCATATTGAGCACTGTCAGAGGGGTGGACTTCTTGGAATTCAAGCCATCAGAAATTGCAGCAGCAGTGGCAATATTTGTTGTGGGGGAAACCCAAACGGTTAACATCGAGAAAGCAATTTCTGTTCTCAGTCTGATCCAACATGTGGACAAGGTAAAGCTAGAGAGAGTGGTGGAGTGCTTGAAAATGATGAGTGAGATGTCATCAAACAGAAGCCCTTATGTGCCCCAAAGCCCGATAGGGGTGTTGGAAGCCGCATGCTTGAGCTATAAAAGCGATGAGTCAAAGTCAAATGGTGGCTCATGTGCAAATTCTTCACATGAAGGCAATGATGCTAAAAGGAGGAAGCTAAACAATAAGAATGGAGTAGAGTTGTAG 1026 0.4464 MAPSFDCVSSLLCAEDNHIFDDNINDYGDHPLHTQNHNLFFLRQDGLPLQSDECVALMVKKECDHLPAANYLNRLRTGDLDFGARKEAIHWIEQVRAHFGFGPLCAYLSINYLDRFLSAYELPKGKAWTMQLLAVACLSLAAKIEETEVPPSLDLQVGESKFVFEARTIQRMELLVLSTLRWRMQAITPFSFIDYFLCKMNDDETPRGEFISRSIQIILSTVRGVDFLEFKPSEIAAAVAIFVVGETQTVNIEKAISVLSLIQHVDKVKLERVVECLKMMSEMSSNRSPYVPQSPIGVLEAACLSYKSDESKSNGGSCANSSHEGNDAKRRKLNNKNGVEL 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3066 341 PANTHER CYCLINS 1 335 IPR039361 -
Sto9g3066 341 Pfam Cyclin, C-terminal domain 187 288 IPR004367 -
Sto9g3066 341 SMART Cyclin_C_2 187 307 IPR004367 -
Sto9g3066 341 MobiDBLite consensus disorder prediction 324 341 - -
Sto9g3066 341 Gene3D - 68 185 - -
Sto9g3066 341 CDD CYCLIN 85 177 IPR013763 -
Sto9g3066 341 Gene3D - 58 278 - -
Sto9g3066 341 SMART cyclin_7 90 178 IPR013763 -
Sto9g3066 341 ProSitePatterns Cyclins signature. 85 116 IPR006671 -
Sto9g3066 341 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 335 - -
Sto9g3066 341 SUPERFAMILY Cyclin-like 169 287 IPR036915 -
Sto9g3066 341 MobiDBLite consensus disorder prediction 311 341 - -
Sto9g3066 341 SUPERFAMILY Cyclin-like 50 184 IPR036915 -
Sto9g3066 341 Pfam Cyclin, N-terminal domain 55 184 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3066 Sto-Chr9 31496594 31498469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3066 10 265 Core Cell Cycle Gene Families AT5G65420 51.923 5.57e-85 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3066 K18810 - gmx:100803873 439.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3066 9 31496594 31498469 Sto9g3066 9 31496594 31498469 ECH