Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3063 ATGGGTTACCTCTCCTGCAATGCAAAGTGTGCAATAGCCACATGCCAATGCGATCCTCAGATCAATCGGGATCTCAAGAAGCACCGAAAAACAAGCACCCATCACAAGCTCCCACCTGAGATCAGAGAGTTTCAGTACTCGGACCTCGTGGCAGCCACAAATGGGTTCTCCCCCGATAGCTTCTTAGGCAAAGGCAGCCACGGCAGCGTCTACAGAGCCACTCTGGACGGCGGCAATCTCATCGCCGCCGTCAAAACAACCAAATTCAAAAAGCCCACCGCCACAAACCACTCCCCCAACTGTACGGGATGTTCCAAGTGTAGCAGCCCCGCCGAGAACGAGATCGAGATTTTATCCAGAGTTCGAAGCCCTCGCCGCCTCGTCAACCTCATCGGCTTCTCCACCGACTCCAACCACAACAAATTGATCGTCGTCCAGTACATGCCCAACGGTTCCCTCTACGATCTCTTGCACTCCACCTCCTCCACGCCTCCTCCCGGTTGGACCCCTCGACTCCGGTTCGCCCTCCAGGTGGCCAAAGCGGTTCACACCCTCCATTCCTCCAACCCTCCGGTTATCCACAGGGATATCAAATCCTCAAACGTGTTGATGGATGAGGATTGGAACGCCAGGCTGGGGGATTTCGGGCTGGCTCTCAGGGGACACGTGGAGGATGTTCGGGTGAAGAGCACGCCACCCGCCGGCACCTTGGGATACCTTGACCCCTGCTATCTTGCGCCGGGGGATCTGAGCGCCAAGAGCGACGTCTTCAGCTTTGGGATATTGTTGTTGGAGATGATGAGTGGTAGAAACGCCATTGATGTGAAGTACAGCCCGCCGTCGGTGGTGGAATGGGCGGTGCCGTTGATAAAGAGGGGTGAATTTCTGGGAATCTGTGACCCCAGGATTGGGACCCCCTCTGACCCGACCGTGATAGAAGAGCTGACGGTGTTGGCGGCGAGGTGCGTGAGATCCACGGCGGAGAAACGGCCTCTGATGGAGGAGGTTGTGGAGTGTTTAAAAGAGGTGAGGAAGAGGATTGAGGCGTCGCGTGCTGTATGGAAGAGTGTGAAGCGGCGAGTGTTGAGGAGATGGGAAGTGAGTGAAGAGGTAGTTGTAAAAGGCGGGAAGAGAAGGAACGGGAAGGTATCGAGTGTGGGAGGCGTAGAGGAAGGTACGAGTGGTGAAGAAGGTAGGAATAATTATAGGAATCATGAAGTGGTGATGAGGACGAGGTCGATAGGTTGTGATAGGGAGATGAAAATGGAAGAGTATTCGAAATTTGTAAGAAGGAATGGATATGGAAGTAGTGTTGGTGTGAGGCTAAACAAGTCCAGGTCTATGGGGTTTTTGCAAACTCCAAGCCTTTTACATTATGGGGCTATTCTCTTTGAAGTGGGCAGGGTTGGGGAAATAAGAGAAACAGGCATCAGTGTTATAGTATAG 1446 0.5339 MGYLSCNAKCAIATCQCDPQINRDLKKHRKTSTHHKLPPEIREFQYSDLVAATNGFSPDSFLGKGSHGSVYRATLDGGNLIAAVKTTKFKKPTATNHSPNCTGCSKCSSPAENEIEILSRVRSPRRLVNLIGFSTDSNHNKLIVVQYMPNGSLYDLLHSTSSTPPPGWTPRLRFALQVAKAVHTLHSSNPPVIHRDIKSSNVLMDEDWNARLGDFGLALRGHVEDVRVKSTPPAGTLGYLDPCYLAPGDLSAKSDVFSFGILLLEMMSGRNAIDVKYSPPSVVEWAVPLIKRGEFLGICDPRIGTPSDPTVIEELTVLAARCVRSTAEKRPLMEEVVECLKEVRKRIEASRAVWKSVKRRVLRRWEVSEEVVVKGGKRRNGKVSSVGGVEEGTSGEEGRNNYRNHEVVMRTRSIGCDREMKMEEYSKFVRRNGYGSSVGVRLNKSRSMGFLQTPSLLHYGAILFEVGRVGEIRETGISVIV 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3063 481 Gene3D Phosphorylase Kinase; domain 1 16 147 - -
Sto9g3063 481 PANTHER OS01G0750732 PROTEIN 1 459 - -
Sto9g3063 481 ProSitePatterns Protein kinases ATP-binding region signature. 62 85 IPR017441 GO:0005524
Sto9g3063 481 SUPERFAMILY Protein kinase-like (PK-like) 38 347 IPR011009 -
Sto9g3063 481 ProSiteProfiles Protein kinase domain profile. 56 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3063 481 Gene3D Transferase(Phosphotransferase) domain 1 148 363 - -
Sto9g3063 481 Pfam Protein kinase domain 60 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3063 481 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Sto9g3063 481 SMART serkin_6 56 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3063 481 PANTHER - 1 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3063 Sto-Chr9 31472448 31475095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3063 15 347 Receptor kinase-like Gene Family AT3G59420 37.101 4.97e-63 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Sto9g3063 Pkinase 3.4e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3063 - - gsj:114415240 537.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0550 5 3492147 3493460 Sto9g3063 9 31472448 31475095 CCT
Sto9g3063 9 31472448 31475095 Sto9g3063 9 31472448 31475095 ECH