Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3042 CTGAGCAGCTTTGTAAGCGGTAAGCGTGCTCTCGGCAGCGTCCTTGCGCTCGGATCCAGTCTTGAACTCAGCGAGGTACCTGTGGTAATCACCCTTCATCTTGAGGTAGAAGACCTTGGAATCACCAGAAGAAGCAGATGGAATAAGTCGGGAATCGAGGAGCTTGAGGATTCCATCGCAGATGTTGGAGAGCTCAGCCTCGATCTTAGATCGGTAGTCACGGATCATGGAGACATGATCCTCGTTGCCACGGCTCTCCTCCTTCTGCTCGATGGAGGAAATAATACGCCAGGAGGCACGGCGGGCACCGATGACGTTCTTGTAGGCGACAGAGAGGAGGTTTCTCTCTTCAACGGTGAGTTCTTCGTTGTCGACGGAGGCGGAGACTTTCTCCATGAACTCGACCATTTCTTCGTAGCGCTCGGCCTGCTCAGCAAGCTTAGCCATGTAGACGTACTCTTCACGAGGCGAGGTAGTGGCCGCCATGGTCAGATCACGGAGATGGTGAGATCTGATCTGATGTGGACAATGGATAGGAGCAAAATACAAGTGGTTTATGATGCTTGCGGTGCTATTTTCTCTCAGGAGGGGCTTCCAACTTTTCAGCAAATCCAGTATCTGAAGAAACTTCTTGACAGAATAGAAGCTATTGATGTTGGAATCGATGAGTTTGGTTTATGTGATTCTCCGATCGGCGGCAGCAGGGGATTGCTTTGTGGGCCGGCTTTCTCTGAAATAACATACATTCACATCCATGAATGTGACCATTTCTCTtttgatGAAGATGCAGATTGGGGTGTTCTGTCTTCCAGCAGGAAAGCGGGATTGGCGAGCAAGGTAATAGATGGAAGAGTGAAAGGAGGAGAGGAAACATCAATATTATTTCCAAGAAGTGGTGGCAATATTCATAGTTTCACAGCGTTGACGCCGTGTGCTATCTTAGACGTGCTTTCTCCTCCATACAATGAAGACTTTGGAAGGCCTTCCACTTATTTCGCTGACTTCCCTATCCCTTCCCTCCCTGGTTATGCGTGGCTTGAGGAAAGACCACTGCCAAATGACCTAACTGTTAAAGGGGCGCCATATCTAGGACCTCCCATTGTAACTGAACATGACTCTTGTCTATGGGGTTACCAAACTAATTATGAGAGAAATACAATTGTTTGTGAGATCTCTCACTCCTGCTGGGTGGCAACCACAGAATTGGAGGAATcgaaggaagattgtgttggcTTGCGAATTAGGCAATACATGGAGCGTTATGAGATTCTCAAAGATATTGGCTCCGGCAATTTCGCTGTAGCTAAGCTAGTTGTAGATAAGTGGACTAAAGACTGCTTTGCTGTCAAGTTCATCGAGAGAGGCCACAAGATTGATGAGCATGTGCAAAGGGAAATCATGAATCATAGGTCGTTGAAGCATCCCAATATTGTTAGATTCAAAGAGGTCCTGCTAACACCAACTCATCTTGCAATAGTGATGGAGTATGCGGCTGGGGGAGAACTCTTTGAGAGGATATGCAATGCTGGTAGATTCAGTGAGGATGAGGCAAGATTTTTCTTTCAGCAATTGATATCAGGAGTCAGTTACTGTCATTCAATGCAAATCTGTCATAGAGATCTTAAGCTTGAAAATACACTCTTAGACGGCAGTACTGCGCCTCGTGTGAAGATATGTGACTTTGGGTACTCAAAGTCATCTGTTTTCCATTCACAACCAAAGTCTACCGTAGGAACTCCGGCCTACATTGCACCAGAGGTTCTATCAAGGAAAGAATATGATGGAAAGATAGCAGATGTTTGGTCATGTGGAGTCACCTTATATGTGATGTTGGTTGGGGCTTATCCCTTTGAAGACCCAGAGGACCCAAGAAACTTCCGGAAAACGATCGGGAGGATACTTAGCGTCCAGTACTCGGTCCCAGATTATGTACGAGTTTCCCCGGAGTGTATACATCTTCTATCACGGATATTTGTGGCGAATCCTGAAAAGAGAATAAGCATAACAGAAATTAAAAGCCACCCATGGTTTTTGAGGAACTTGCCCATTGAACTAGTGGAGGGAGGAAGCTGGCAGAGCAATGATGTTAATAATCCATCGCAAAGTGTTGAGGAAGTGCTGTCTATAATACAAGAGGCAAGAAAACCTCCCAACGTGCCCATGGTTGGTGGCCTTCTTGCTGGAGGAAGCAGCATGGACCTTGATGACTTGGATGCTGATGAAGATATAGAAAGTAGTGGCGATTTTGCGGGCCTTCTTTAA 2262 0.4589 LSSFVSGKRALGSVLALGSSLELSEVPVVITLHLEVEDLGITRRSRWNKSGIEELEDSIADVGELSLDLRSVVTDHGDMILVATALLLLLDGGNNTPGGTAGTDDVLVGDREEVSLFNGEFFVVDGGGDFLHELDHFFVALGLLSKLSHVDVLFTRRGSGRHGQITEMVRSDLMWTMDRSKIQVVYDACGAIFSQEGLPTFQQIQYLKKLLDRIEAIDVGIDEFGLCDSPIGGSRGLLCGPAFSEITYIHIHECDHFSFDEDADWGVLSSSRKAGLASKVIDGRVKGGEETSILFPRSGGNIHSFTALTPCAILDVLSPPYNEDFGRPSTYFADFPIPSLPGYAWLEERPLPNDLTVKGAPYLGPPIVTEHDSCLWGYQTNYERNTIVCEISHSCWVATTELEESKEDCVGLRIRQYMERYEILKDIGSGNFAVAKLVVDKWTKDCFAVKFIERGHKIDEHVQREIMNHRSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVFHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIGRILSVQYSVPDYVRVSPECIHLLSRIFVANPEKRISITEIKSHPWFLRNLPIELVEGGSWQSNDVNNPSQSVEEVLSIIQEARKPPNVPMVGGLLAGGSSMDLDDLDADEDIESSGDFAGLL 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3042 753 PANTHER SERINE/THREONINE-PROTEIN KINASE SAPK1 419 745 - -
Sto9g3042 753 ProSitePatterns Serine/Threonine protein kinases active-site signature. 536 548 IPR008271 GO:0004672|GO:0006468
Sto9g3042 753 ProSiteProfiles Protein kinase domain profile. 421 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3042 753 SUPERFAMILY Protein kinase-like (PK-like) 413 686 IPR011009 -
Sto9g3042 753 SMART serkin_6 421 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3042 753 Gene3D Phosphorylase Kinase; domain 1 403 496 - -
Sto9g3042 753 Pfam PCO_ADO 270 367 IPR012864 GO:0016702
Sto9g3042 753 CDD STKc_SnRK2 420 676 - -
Sto9g3042 753 Pfam Protein kinase domain 421 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3042 753 SUPERFAMILY RmlC-like cupins 177 331 IPR011051 -
Sto9g3042 753 ProSitePatterns Protein kinases ATP-binding region signature. 427 450 IPR017441 GO:0005524
Sto9g3042 753 Gene3D Transferase(Phosphotransferase) domain 1 497 684 - -
Sto9g3042 753 PANTHER SERINE/THREONINE KINASE 419 745 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3042 Sto-Chr9 31326960 31337091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3042 420 696 CBL-interacting serine-threonine protein kinases AT4G24400 41.754 1.92e-63 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Sto9g3042 Pkinase 2.4e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3042 K14498 - qsu:112026336 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3042 9 31326960 31337091 Sto9g3042 9 31326960 31337091 ECH