Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3026 ATGGATAAGTTATGCTGTTTTAATTCTTCCTACTCCCAGCTTGTAGCTGCACGTGCTTCATCCAGCACAGGTAAGGGGAAAAACCATGAAGGATCAGTAAAGTATGGTTTCAGCCTTGTAAAAGGGAAAGCTAATCATCCGATGGAGGATTATCATGTTGCCAAGTTTGTGAATATACAGGGGAAAGAGTTGGGGTTGTTTGCTATATATGATGGCCATCTGGGAGAACGTGTACCTGCATATTTGCAGAAAAATCTGTTTTCCAATATACTAAAGGAGGAGGAATTTTGGGATAACCCCACTGGATCTATCTCAAAAGCATATGAGATGACAGATCAGGCAATTCTTTCCCGTAGTTCTGATTTGGGGCGTGGAGGATCAACTGCTGTAACTGCAATATTGATTAATGGCCAAAGGTTATGTGTAGCTAATGTTGGAGATTCACGAGCAGTTCTTTCAAGAAAAGGTCAAGCGGTACAAATGACTACAGATCATGAGCCCAACACAGAGCGAGGCAGCATTGAGACTAAAGGTGGTTTTGTCTCCAACATTCCAGGTGACGTGCCGAGAGTAAATGGGCAACTGGCTGTTTCTCGTGCATTTGGAGACAAGAGCCTCAAGTCACATTTGCGCTCAGACCCTGATGTGCAGACCGTTGATATAGACGTTGATACTGATATTCTGATCCTTGCTAGTGATGGACTTTGGAAGGTAATGCATAATCAAGAGGCAGTGGATATTGCTAGAAGGACGAAAGACCCACTGAAAGCAGCTAAGCAATTAACAGCAGAAGCACTAAAAAGAGACAGTAAAGACGATATATCTTGCGTTGTGGTTAGACttaggtga 849 0.4264 MDKLCCFNSSYSQLVAARASSSTGKGKNHEGSVKYGFSLVKGKANHPMEDYHVAKFVNIQGKELGLFAIYDGHLGERVPAYLQKNLFSNILKEEEFWDNPTGSISKAYEMTDQAILSRSSDLGRGGSTAVTAILINGQRLCVANVGDSRAVLSRKGQAVQMTTDHEPNTERGSIETKGGFVSNIPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDVQTVDIDVDTDILILASDGLWKVMHNQEAVDIARRTKDPLKAAKQLTAEALKRDSKDDISCVVVRLR 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3026 282 SMART PP2C_SIG_2 45 281 IPR001932 -
Sto9g3026 282 MobiDBLite consensus disorder prediction 156 177 - -
Sto9g3026 282 CDD PP2Cc 33 281 IPR001932 -
Sto9g3026 282 SUPERFAMILY PP2C-like 32 281 IPR036457 -
Sto9g3026 282 PANTHER PROTEIN PHOSPHATASE 2C 1 281 IPR015655 GO:0004722|GO:0006470
Sto9g3026 282 Pfam Protein phosphatase 2C 43 274 IPR001932 -
Sto9g3026 282 PANTHER PROTEIN PHOSPHATASE 2C 10-RELATED 1 281 - -
Sto9g3026 282 Gene3D - 29 282 IPR036457 -
Sto9g3026 282 SMART PP2C_4 30 279 IPR001932 -
Sto9g3026 282 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3026 Sto-Chr9 31200388 31202423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3026 1 282 PP2C-type Phosphatase Gene Family AT1G22280 72.222 6.18e-150 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3026 K17506 - gmx:100797292 478.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3026 9 31200388 31202423 Sto9g3026 9 31200388 31202423 ECH