Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2982 ATGGACATAACGaacataaatttgaaaattcaagACGTTTGTTATCATACTCATAATCTATTCCCTTTCGTCACGACATTGAATTTcgcaaagagaaaaaaaaattCAATCTACGAACGCTGTGTAGAACTCAGCCACTGTTCTTCATTAGTTGCAGACAGCAAATTCGATCTAGGGCTTCATGTCGAAGCCCTAATTAGGAGAACTGTGGTTAGGGCCTCGAAATGGACCGAGCAAAAATCCCCTTATGAAACTCTTGAATTAGAAAGAGATGCTGACGAGGAGCAGATAAAGAATGCTTATAGACGCTTGGCTAAATTTTATCATCCGGATGTATATGATGGTAGAGGAACCCTTGAGGAAGGTGAAACAGCAGAAGCTAGATTCATCAAAATTCAAGCTGCTTATGAATTACTTATAGATGATAAGAGGCGGTGGCAGTATGATATGGATAACCGAGTGAACCCAATGAAAGCATCTCAGGCATGGATGGAGTGGCTTATGAAAAAGCGAAAGGCTTTTTATCAGCGGGGTGATATGGCGATTGCTGCTTGGGCAGAGCAGCAACAACGGGAATTAAATATTCGTGCACGTAGTCTATCTCGTACAAAGATTGAtccagaagaagaaaggaagatcTTGGCAAGAGAAAAGAAAGCTTCTGCCGAATATTTCTCCAATACCATTAAGAGGCATACACTAGTACTCAAGAGAAGGGATTTAATGCGAAGAAAGGCtgaggaagagaaaaagaagactATCATTCGGCTGTTAGCTGAAGAGGGTCTTGAGCTCGATCCAGAAAGTGATGAGGCACTGTAG 822 0.3796 MDITNINLKIQDVCYHTHNLFPFVTTLNFAKRKKNSIYERCVELSHCSSLVADSKFDLGLHVEALIRRTVVRASKWTEQKSPYETLELERDADEEQIKNAYRRLAKFYHPDVYDGRGTLEEGETAEARFIKIQAAYELLIDDKRRWQYDMDNRVNPMKASQAWMEWLMKKRKAFYQRGDMAIAAWAEQQQRELNIRARSLSRTKIDPEEERKILAREKKASAEYFSNTIKRHTLVLKRRDLMRRKAEEEKKKTIIRLLAEEGLELDPESDEAL 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2982 273 Coils Coil 83 103 - -
Sto9g2982 273 CDD DnaJ 82 141 IPR001623 -
Sto9g2982 273 Pfam DnaJ domain 82 149 IPR001623 -
Sto9g2982 273 ProSitePatterns Nt-dnaJ domain signature. 129 148 IPR018253 -
Sto9g2982 273 Gene3D DnaJ domain 68 180 IPR036869 -
Sto9g2982 273 ProSiteProfiles dnaJ domain profile. 81 152 IPR001623 -
Sto9g2982 273 PANTHER CO-CHAPERONE PROTEIN DJLA 26 269 - -
Sto9g2982 273 SMART dnaj_3 80 144 IPR001623 -
Sto9g2982 273 SUPERFAMILY Chaperone J-domain 71 150 IPR036869 -
Sto9g2982 273 PRINTS DnaJ domain signature 83 101 IPR001623 -
Sto9g2982 273 PRINTS DnaJ domain signature 101 116 IPR001623 -
Sto9g2982 273 PRINTS DnaJ domain signature 124 144 IPR001623 -
Sto9g2982 273 PANTHER LD30543P 26 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2982 Sto-Chr9 30852273 30855186 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2982 73 149 C2H2 Transcription Factor Family AT1G74250 37.662 1.71e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2982 - - jre:109021337 360.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2982 9 30852273 30855186 Sto9g2982 9 30852273 30855186 ECH