Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2975 ATGGCCTTGCAGAATATTGGTGCTTCAAACCGTGATGATGCCTTCTATAGGTACAAGATGCCAAAAATGATAACCAAGATTGAAGGTAGAGGTAATGGCATCAGAACTAATGTTGTTAACATGGTTGAGATTGCAAAAGCCCTAGCTAGACCTGCAGCATATACTACAAAGTATTTTGGTTGTGAGCTTGGAGCCCAGTCAAAATTTGATGAGAAAACTGGAACTTCTCTTGTGAATGGGGCCCATGACACTGCAAAGCTGGCAGGATTACTGGAGAATTTCATTAAGAAATATGTTCAATGCTACGGTTGTGGGAACCCTGAAACCGAGATAGTGATTACAAAGACGCAGATGCTCACCTTGAAGTGTGCGGCCTGTGGATTTATCTCTGATGTTGATATGAGGGACAAGCTTACGACTTTTATACTCAAGAATCCACCTGAGCAGAAGAAGGGTTCAAAGGACAAGAAGGCAATGAGGAGGGCTGAAAAAGAGCGGCTTAAAGAGGGTGAGGCTGCTGATGAGGAACTAAAGAAGcttaaaaaagaaggaaaaaagaaaggcTCTTCAGTTAACTCGAAGGATGGTGCTTCTAAAGCatcatcaaagaagaaaaacacTGGTTCTGATGAGGACCACTCCCCTGCTCACAGTAATGCTGATGAAAATGATCAAgctgatggtgatgatgatgatgatgtgcagTGGCAGACTGACACTTCATTGGAGGCAGCTCGGCAGCGTATCCAGGAGCAGTTAAGTGCTGTTACTGCTGATATGGTCATGCTATCAACTGGCAGTGAAGAGAAATCCCCAAAACATTCTCCAAAGCACAAGGTAACATCTGAGGCCAAAGAGCATGGCAATGGTGTTGCTGTTAGTACCCATGAGAGACTTGTTGAGGAAATAAGGGACTATTTGAAGAAGGGTGAGCCTGCTGGTCAGCTCAAAACTTTTCTGAGTTCTCTCTCTGGCAGCTCTCAAGAGATTATCAATGCTTTACTTGAAGCTCTTTTTGGAGAGGTTGGCAAAGGATTTGCCAAAGTAGCTTCAAAAAGGAAGAACTACCTTGTTGTTGCTGCTCAATATGGAGGATCTCAAATGGTTTTGTTGCATGCTTTAGAATCTTTTTGTGAGAAAGCAAGTACGGAAGCAGTGAAGGAGGTTGCTTTGGTCTTAAAGGAGCTCTATGACTCTGATGTGTTGGAGGAGGAGTCTATACTTGAATGGTACCAGCAGGGCTTGGTTGGTAGCAAGAAGAGCTCGCAAATCTGGAAGAGCATCAAGCCTTTCATTGAATGGCTTCAGAATGCCGAGTCTGAGTCTGAGGAAGAATAA 1338 0.4148 MALQNIGASNRDDAFYRYKMPKMITKIEGRGNGIRTNVVNMVEIAKALARPAAYTTKYFGCELGAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIVITKTQMLTLKCAACGFISDVDMRDKLTTFILKNPPEQKKGSKDKKAMRRAEKERLKEGEAADEELKKLKKEGKKKGSSVNSKDGASKASSKKKNTGSDEDHSPAHSNADENDQADGDDDDDVQWQTDTSLEAARQRIQEQLSAVTADMVMLSTGSEEKSPKHSPKHKVTSEAKEHGNGVAVSTHERLVEEIRDYLKKGEPAGQLKTFLSSLSGSSQEIINALLEALFGEVGKGFAKVASKRKNYLVVAAQYGGSQMVLLHALESFCEKASTEAVKEVALVLKELYDSDVLEEESILEWYQQGLVGSKKSSQIWKSIKPFIEWLQNAESESEEE 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2975 445 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Sto9g2975 445 MobiDBLite consensus disorder prediction 148 223 - -
Sto9g2975 445 MobiDBLite consensus disorder prediction 265 293 - -
Sto9g2975 445 Gene3D - 105 145 - -
Sto9g2975 445 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-1-RELATED 1 445 - -
Sto9g2975 445 MobiDBLite consensus disorder prediction 143 235 - -
Sto9g2975 445 Gene3D - 2 104 - -
Sto9g2975 445 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Sto9g2975 445 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 445 IPR045196 GO:0003743|GO:0006413
Sto9g2975 445 SMART 542_3 354 441 IPR003307 GO:0005515
Sto9g2975 445 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 10 101 IPR016189 GO:0003743|GO:0006413
Sto9g2975 445 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Sto9g2975 445 ProSiteProfiles W2 domain profile. 285 445 IPR003307 GO:0005515
Sto9g2975 445 Pfam eIF4-gamma/eIF5/eIF2-epsilon 367 445 IPR003307 GO:0005515
Sto9g2975 445 CDD W2_eIF5 294 443 - -
Sto9g2975 445 SUPERFAMILY ARM repeat 297 439 IPR016024 -
Sto9g2975 445 MobiDBLite consensus disorder prediction 270 285 - -
Sto9g2975 445 Gene3D - 294 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2975 Sto-Chr9 30809740 30811077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2975 1 438 Eukaryotic Initiation Factors Gene Family AT1G36730 66.966 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2975 K03262 - tcc:18592244 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2975 9 30809740 30811077 Sto9g2975 9 30809740 30811077 ECH