Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2968 ATGGGTTCTCTGGTGACACCGACGAGTGGGGAGGACGGTTCTACACCAGTCGCCGGCAACGGAAAGGCTCATGCTGCCGATGAGGTACCTTTGCAGCCGACAGAGCCTGTCGAAATGGCGTCGGCGGCACCGCTGGAATCCGACAAGTCAAAGAGACGGAGAATGGCTATGCTTCCTCTGGAGGTTGGTACTAGGGTCTTGTGCCGTTGGAGGGACGGGAAGTTTCACCCTGTTAAAGTCATTGAACGCCGGAAGATGCAGACCGGTGGCCCCAATGATTACGAGTATTATGTTCATTACACTGAGTTCAATAGGAGGCTTGATGAGTGGGTGAAGCTTGAACAACTCGATCTTGATTCAGTGGAGGCTGTTGTTGATGAGAAAGTTGAGGATAAGGTGACAAGCTTGAAGATGACACGCCACCAAAAGAGGAAGATTGATGAGACACACGTTGAGGAGGGCCATGAGGAACTTGATGCTGCTAGCTTGCGAGAGCATGAGGAATTTACGAAAGTGAAAAATATAGCTACCATTGAACTTGGAAGATATGAGATTGAGACATGGTACTTCTCCCCCTTCCCACCAGAATACAATGACTGTTTGAAGCTGTATTTTTGTGAGTTTTGCCTCAATTTTATGAAGCGCAAAGAACAGCTTCAGAGGCATATGAGGAAGTGTGACCTCAAGCATCCACCTGGTGATGAGATATACAGAAGTGGTACACTGTCAATGTTTGAGGTTGATGGCAAGAAGAACAAGATTTATGGGCAGAATCTTTGTTATCTGGCTAAGttgtttcttgatcataagaCCCTCTATTATGATGTTGACCTGTTTTTGTTCTATGTTTTGTGTGAATGTGATGACCGAGGATGCCATATGGTTGGCTATTTCTCCAAgGAAAAACATTCTGAGGAATCCTATAATTTGGCATGCATCCTTACACTTCCACCCTACCAAAGGAAAGGCTATGGCAAATTTCTAATAGCTTTCTCATATGAACTTTCAAAGAAGGAGGGCAAAGTTGGCACGCCTGAAAGACCTCTTTCTGACCTTGGTTTGCTGAGCTACAGAGGATATTGGACCAGGGTTCTTTTAGACATCTTGAAAAAGCACAAGGGTAATATATCTATCAAGGAGTTGAGTGACATGACGGCCATTAAAGCTGAAGATATACTGACTACCCTTCAAAGTCTAGAATTGATTCAATACAGGAAAGGCCAGCATGTTATATGTGCAGATCCAAAAGTTTTGGATCGCCATCTTAAAGCTGCTGGAAGAGGTGGTCTTGATGTCGACGTGAGCAAATTGATCTGGACTCCTTACAAAGAACAAGGTTGA 1341 0.443 MGSLVTPTSGEDGSTPVAGNGKAHAADEVPLQPTEPVEMASAAPLESDKSKRRRMAMLPLEVGTRVLCRWRDGKFHPVKVIERRKMQTGGPNDYEYYVHYTEFNRRLDEWVKLEQLDLDSVEAVVDEKVEDKVTSLKMTRHQKRKIDETHVEEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPPEYNDCLKLYFCEFCLNFMKRKEQLQRHMRKCDLKHPPGDEIYRSGTLSMFEVDGKKNKIYGQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKEGKVGTPERPLSDLGLLSYRGYWTRVLLDILKKHKGNISIKELSDMTAIKAEDILTTLQSLELIQYRKGQHVICADPKVLDRHLKAAGRGGLDVDVSKLIWTPYKEQG 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2968 446 Gene3D - 49 170 - -
Sto9g2968 446 Pfam RNA binding activity-knot of a chromodomain 60 118 IPR025995 -
Sto9g2968 446 MobiDBLite consensus disorder prediction 1 15 - -
Sto9g2968 446 Gene3D - 229 441 - -
Sto9g2968 446 Pfam MOZ/SAS family 231 408 IPR002717 GO:0004402|GO:0006355|GO:0016573
Sto9g2968 446 SUPERFAMILY Chromo domain-like 54 171 IPR016197 -
Sto9g2968 446 PANTHER HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 2 20 445 - -
Sto9g2968 446 MobiDBLite consensus disorder prediction 1 50 - -
Sto9g2968 446 Gene3D - 349 429 IPR036388 -
Sto9g2968 446 ProSiteProfiles MYST-type histone acetyltransferase (HAT) domain profile. 170 441 IPR002717 GO:0004402|GO:0006355|GO:0016573
Sto9g2968 446 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 171 442 IPR016181 -
Sto9g2968 446 CDD NAT_SF 282 340 - -
Sto9g2968 446 SMART chromo_7 74 133 IPR000953 -
Sto9g2968 446 Gene3D - 171 227 - -
Sto9g2968 446 Pfam MYST family zinc finger domain 172 226 IPR040706 -
Sto9g2968 446 PANTHER HISTONE ACETYLTRANSFERASE 20 445 - -
Sto9g2968 446 CDD CBD_MOF_like 63 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2968 Sto-Chr9 30779771 30783818 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2968 3 446 C2H2 Transcription Factor Family AT5G64610 84.685 0.0 789
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2968 K11308 - cit:102608219 813.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2968 9 30779771 30783818 Sto9g2968 9 30779771 30783818 ECH