Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sto9g2966 | ATGACTGGGGGCCGATGTCACCGCAGGAAGAAACTAATGGGTAGGGGTGTGGAAGGAGGTGGCGGCACCGAGGAGAGCCCTTGCCCAGTTTCGAGGGTTCCGTTTAAATTCCTGGCGACCAAACCGGGAAATTCTGATAATTCCACTGGACTTGAAATTGATTACTACTCGCAGGCTAGAAAAGCGCTAAGTGAGCGCTCGCCTTTCGATGTTGCGGAAGAGACGTCGACGTCCACTGTGCCCACTCTGCCTAGTGGATTGGCAAGTTTCTTAAACCGCCATTCTGAAAGTCGGAGACGTCACAAGAAGGCTCATTCGGGCGCGGACAAGAAATCGTCTAGAGTATGTGAGAAGTCGCGGAGTTCAAGCATTTGGGTTGAGACTGAGGAGTATTTTAGAGACTTAAAATTGCCTGATATAGACACCTTGTTGGAGGCATCAACGCCTTCTAGTTTAGCTGCTCGGAAGTGTTTTTCTATTCCACTAGTGGAAACTGCTCCGAGTTTAAATGTAGTTAGTAATGAGAAGGACAAGGAGACTGATGGTAACATAAATAGCGAGGTTGTGAAAAATGAGGGTGCTGTCAGGGAAAGTAACAGTGTTGCAGCTCAAGTTTTGCTTCAGGACGACAAGGATCATGCTACTTTGTATTCGTCTAGTAGTTTAGAATGGCTTTTAGGATGTAGGAATAAGATTTCTCAATCTTCTGAGCGCCCTTCCAAGAAGAGGAAGCTTTTGGGTGGTGATGCTGGgttggagaaaattttaattgctAGTCCTTGTGAAGGAGACTCTTCTTTGTGCCATTTTTGCCACATGGGAGACACCAGTGGAGAGTCCAACCAATTGATTGTCTGCGATATTTGTAAAGTTGTAGTTCATAAGAAATGCTACGGTGTGCAAGGTGATGTAGACGAGTCTTGGTTATGTTCCTGGTGCAAGCAAAAGGATGAAATTGTTGAAGTGGCCAACCCTTGTTTTCTTTGCCCAAAGAAGGGTGGCGCTTTAAAACCCATTAATAGAAGTGCAGAAAGTGTTGGATCTGTGCAATTTGCTCACTTGTTTTGCTGTTTGTGGATGCCTGAGGCTTATGTAGAGGATTTGAAAAAGATGGAGCCTGTTATGAATGTAGGAGGAGTAAAGGAAACCCGGAGAAAACTAGTCTGTAATGTGTGCAAGGTGAAGTTTGGTGCTTGTGTTCGTTGTAGCCATGGTCATTATCAAGGTGCAGATCAGACATTTCACCACCTTTGCAATGTATTTGTCCAATGTGTTTTGTCCATTAAGTGCAGGGACTTGCACAAAGCTTGTAATTTAGTGTTGGGTGGTGTTACAGGAACCTGCAGGACATCTTTCCATCCTCTATGTGCAAGGGAAGCTAGGCACAGGATGGAGATTGAGTTACGGGCCTTTTGCTCCAAGCACTCAGAGTTACAAGAGAACAGCAGCATCTTGCCATCAGGTGGTTCTGTAGCATTTGGTAGTGAGTTCTCTGTTGCCAACAGCCTTCCAGTGACATTGCCAGCTGACAGACAACATGATTTGAAATTTGGTTGCACAAATGGAGACAATATTGGGATAGCTTCAGATGGTAGTCCTGATAAATTGAGCCATAGTGAATCACTGGATGCAGGATCGTCTGATTGTAGGTTAAGTGTTTGTGACACGTTGGAATGTGGCAGTTTGCCCCAGACTGATGAGAACGTTAATTCATCCGACTCACTTGGGTTTGCACTTGTTCTGAAGAAGTTGATAGATCGAGGAAAAGTTGATGCTAAAGATGTAGCTTTGGAGATTGGCATTTCACCTGATACATTAATTGCAAATATCAATGAGTCTTACATGGCCCCGGACGTGCAACTCAAAATAGTCAATTGGCTAAAAGCTCATGTTTATACTAATGCATTTCAAAAAAGTTTGAAAGTCAAATTCAAGCCACCCAATTCATCCAACGTGGAGAAGGAAGTCACCGATGGTTCTGATACATTACCAATATCAGATTCAGAGTTACCAGATCCCGTTGCTGTTAAGTCAGTACCACCAAGGAGAAGAACCATCAACAATATTAGGATTTTGAAGGATAACAAAGTGATATGTTCATCAGAGGTGGTCTCTAGTGAGAATGGGATGCCAATGGACAAGGCCAAAGTTGGTCAGTTTGACCACGTACATATAGAATCATTAAATGAATCATCCATTTCAGATGCAACTGAATTGAAATTAACccagtctaaggatacttttcctGAATCTCAAGGGAATGCAGACAAACCTTGCAAAAGCAGCTTATCTGGATGTGTTTCAGAAGAAAAATGGAAATCTGGGTTCATATCAGCATTCTCTTTTAAAAGCCAGGTTTCATTTTGTTTGTTATGCAGGAAGATTGAGGAGAACTCTAGCTACATTCACCCATACATCAGTAAAAAATTATTGCAGATTCATGATGGGGTGCTTTCAGAGGATGTTATATGTCCAAAGGAGGAAGGAAATCTTTATTTGGATGAATCGTTGAAGACTAGTGGTTGCTCCACCAACCAAAATCCAGAATTAACTTGTCCTGAAGATGAAGTGGAGGGGGAACTTATATATTTTCAGCATAGATTATTGCAGAATACATTTGCAAGAAAGAAGCTTGCTGATAATTTAATCTCTATTGTAGCTATGAGTCTTCCACAGGAGATTGATGCAGTACATCAGCAAAGATGGGATGCTGTGCTTGTTAACCAGTATCTGTGTAAACTTAAGGAGGCAAAAAAGCAGggcagaaaagagagaaggcaCAAGGAAGCTCAGGCAGTTTTAGCTGCTGCAACTGCTGCTGCTGCAGCTTCTTCTAGGGTTTCTTCATTCCGGAAGGATTCTTTAGATGAATCTTTGCAGCCAGAGaaTTTGTTAAAGCACAGTTTTAGTGGGAGAGCTGGTGTTAGCTCTCAGCCAATGCCACGGGCCAAAGAAACACTTCCAAGAGTAGCTGTGGCAAGAACTTCATCAGAGAAATATTCAGATTCATGTCTTCTATCCACAGATATTTCTAAGGAGCACCCCAGATCATGCGATATTTGCAGACGATCTGAGACTATTTTGAACCCTATTCTTGTCTGCTCTGGTTGCAAGGTTGCAGTTCACTTGGATTGCTATCGTAGTGTGAAGGAATTCACAGGTCCATGGCACTGTGAATTATGTGAAGATTTGTCATCTAGAATATCTGGGGCACCAGCTATCAATTTCTGGGAGAAGCCTTATTTTGTTGCGGAATGTGGAATTTGTGGTGGTACTACTGGTGCTTATAGGAAGTCTTCGGATGGTCAATGGGTCCATGCCTTTTGTGCTGAGGAGACTGTGTTGAAAGGAGCTGATACTTGCTGCATCTGCCACCGCAAGTACGGTGTATGCTTAAAGTGTAGCTATGGCCATTGTCAGACTGCATTTCATCCAACCTGTGCTAGAAGTGCTGGTTTTTACATGAATGTGAGAACTGCCAGTGGCAAGGTGCAGCACAGGGCTTACTGTGAAAAGCATGGCTTTGAGCAGAGGGCAAAGGCTGAAAGTCAAAAACATGGAATTGAAGAGTTGAAAAGTATCAAACAAATTAGGGTTGAACTAGAGAAATTGCGTCTCCTTTGTGAAAGAATTGTTAAACGTGAAAAAATAAAGCGGGAATTGGTTCTATGCTCACATGAAATACTTGCCTTCAAAAGAGATCATGTTGCTAGGTCTGTCTTGGTTCATAGCCCTTTCTTCCTTCCCGATTGTAGTTCAGAATCAGCTACGACATCCCTTAAAGGGAACACAGAGGGATACAGATCATGCAGTGAAGCAGTTCAAAGGTCAGATGATGTAACTGTGGACAGCACAGTTTCTGCCAAGCATCGAGTAAGAGTTCCTGTAACCATGGACAATGACCCGAAGTTGGAGGATGACTGTTCAACCTCACAAAGCCGTTATAATCATAAGATTCCAGAGAGGGTGCAATTTTCTGGCAAGCAGATTCCTCATAGAGCTTCTATCATATCACGGAATCTTTCGGATGAGGGTGGATGGAGATCAAAATCTAGAAAGCATGCAGAGACATTTGGGAAAGAGCTTGTTATGACGTCAGATGAAGCATCCATGAAGAACTTAAAGTTACCCAAGGGATATGCTTATGTTCCTGCTGATTGTTTGTCAAATGATAAGCAATCTAACCAGGACGTATTTTCTAATGAACCTGTGGAACGCGATAGATAA | 4227 | 0.4223 | MTGGRCHRRKKLMGRGVEGGGGTEESPCPVSRVPFKFLATKPGNSDNSTGLEIDYYSQARKALSERSPFDVAEETSTSTVPTLPSGLASFLNRHSESRRRHKKAHSGADKKSSRVCEKSRSSSIWVETEEYFRDLKLPDIDTLLEASTPSSLAARKCFSIPLVETAPSLNVVSNEKDKETDGNINSEVVKNEGAVRESNSVAAQVLLQDDKDHATLYSSSSLEWLLGCRNKISQSSERPSKKRKLLGGDAGLEKILIASPCEGDSSLCHFCHMGDTSGESNQLIVCDICKVVVHKKCYGVQGDVDESWLCSWCKQKDEIVEVANPCFLCPKKGGALKPINRSAESVGSVQFAHLFCCLWMPEAYVEDLKKMEPVMNVGGVKETRRKLVCNVCKVKFGACVRCSHGHYQGADQTFHHLCNVFVQCVLSIKCRDLHKACNLVLGGVTGTCRTSFHPLCAREARHRMEIELRAFCSKHSELQENSSILPSGGSVAFGSEFSVANSLPVTLPADRQHDLKFGCTNGDNIGIASDGSPDKLSHSESLDAGSSDCRLSVCDTLECGSLPQTDENVNSSDSLGFALVLKKLIDRGKVDAKDVALEIGISPDTLIANINESYMAPDVQLKIVNWLKAHVYTNAFQKSLKVKFKPPNSSNVEKEVTDGSDTLPISDSELPDPVAVKSVPPRRRTINNIRILKDNKVICSSEVVSSENGMPMDKAKVGQFDHVHIESLNESSISDATELKLTQSKDTFPESQGNADKPCKSSLSGCVSEEKWKSGFISAFSFKSQVSFCLLCRKIEENSSYIHPYISKKLLQIHDGVLSEDVICPKEEGNLYLDESLKTSGCSTNQNPELTCPEDEVEGELIYFQHRLLQNTFARKKLADNLISIVAMSLPQEIDAVHQQRWDAVLVNQYLCKLKEAKKQGRKERRHKEAQAVLAAATAAAAASSRVSSFRKDSLDESLQPENLLKHSFSGRAGVSSQPMPRAKETLPRVAVARTSSEKYSDSCLLSTDISKEHPRSCDICRRSETILNPILVCSGCKVAVHLDCYRSVKEFTGPWHCELCEDLSSRISGAPAINFWEKPYFVAECGICGGTTGAYRKSSDGQWVHAFCAEETVLKGADTCCICHRKYGVCLKCSYGHCQTAFHPTCARSAGFYMNVRTASGKVQHRAYCEKHGFEQRAKAESQKHGIEELKSIKQIRVELEKLRLLCERIVKREKIKRELVLCSHEILAFKRDHVARSVLVHSPFFLPDCSSESATTSLKGNTEGYRSCSEAVQRSDDVTVDSTVSAKHRVRVPVTMDNDPKLEDDCSTSQSRYNHKIPERVQFSGKQIPHRASIISRNLSDEGGWRSKSRKHAETFGKELVMTSDEASMKNLKLPKGYAYVPADCLSNDKQSNQDVFSNEPVERDR | 1408 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sto9g2966 | 1408 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1007 | 1066 | IPR013083 | - | |
| Sto9g2966 | 1408 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 258 | 319 | IPR013083 | - | |
| Sto9g2966 | 1408 | MobiDBLite | consensus disorder prediction | 66 | 115 | - | - | |
| Sto9g2966 | 1408 | MobiDBLite | consensus disorder prediction | 70 | 92 | - | - | |
| Sto9g2966 | 1408 | PANTHER | PHD-FINGER DOMAIN CONTAINING PROTEIN FAMILY-RELATED | 441 | 484 | - | - | |
| Sto9g2966 | 1408 | PANTHER | PHD-FINGER DOMAIN CONTAINING PROTEIN FAMILY-RELATED | 852 | 1399 | - | - | |
| Sto9g2966 | 1408 | PANTHER | PHD-FINGER DOMAIN CONTAINING PROTEIN FAMILY-RELATED | 218 | 407 | - | - | |
| Sto9g2966 | 1408 | ProSitePatterns | Zinc finger PHD-type signature. | 1018 | 1061 | IPR019786 | - | |
| Sto9g2966 | 1408 | SMART | PHD_3 | 1120 | 1174 | IPR001965 | - | |
| Sto9g2966 | 1408 | SMART | PHD_3 | 1017 | 1062 | IPR001965 | - | |
| Sto9g2966 | 1408 | SMART | PHD_3 | 267 | 314 | IPR001965 | - | |
| Sto9g2966 | 1408 | MobiDBLite | consensus disorder prediction | 647 | 664 | - | - | |
| Sto9g2966 | 1408 | MobiDBLite | consensus disorder prediction | 1388 | 1408 | - | - | |
| Sto9g2966 | 1408 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 320 | 439 | IPR013083 | - | |
| Sto9g2966 | 1408 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1111 | 1175 | IPR013083 | - | |
| Sto9g2966 | 1408 | ProSiteProfiles | Zinc finger PHD-type profile. | 1015 | 1064 | IPR019787 | - | |
| Sto9g2966 | 1408 | Pfam | PHD-finger | 281 | 314 | - | - | |
| Sto9g2966 | 1408 | Pfam | PHD-finger | 1029 | 1062 | - | - | |
| Sto9g2966 | 1408 | MobiDBLite | consensus disorder prediction | 528 | 547 | - | - | |
| Sto9g2966 | 1408 | SUPERFAMILY | FYVE/PHD zinc finger | 1013 | 1063 | IPR011011 | - | |
| Sto9g2966 | 1408 | ProSiteProfiles | Extended PHD (ePHD) domain profile. | 323 | 476 | IPR034732 | - | |
| Sto9g2966 | 1408 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
| Sto9g2966 | 1408 | MobiDBLite | consensus disorder prediction | 647 | 673 | - | - | |
| Sto9g2966 | 1408 | MobiDBLite | consensus disorder prediction | 970 | 989 | - | - | |
| Sto9g2966 | 1408 | Coils | Coil | 1194 | 1214 | - | - | |
| Sto9g2966 | 1408 | PANTHER | PHD FINGER PROTEINS | 441 | 484 | - | - | |
| Sto9g2966 | 1408 | PANTHER | PHD FINGER PROTEINS | 852 | 1399 | - | - | |
| Sto9g2966 | 1408 | PANTHER | PHD FINGER PROTEINS | 218 | 407 | - | - | |
| Sto9g2966 | 1408 | SUPERFAMILY | FYVE/PHD zinc finger | 257 | 332 | IPR011011 | - | |
| Sto9g2966 | 1408 | CDD | ePHD | 1086 | 1173 | - | - | |
| Sto9g2966 | 1408 | ProSitePatterns | Zinc finger PHD-type signature. | 268 | 313 | IPR019786 | - | |
| Sto9g2966 | 1408 | Pfam | PHD-like zinc-binding domain | 1118 | 1173 | - | - | |
| Sto9g2966 | 1408 | ProSiteProfiles | Zinc finger PHD-type profile. | 265 | 316 | IPR019787 | - | |
| Sto9g2966 | 1408 | Pfam | PHD-zinc-finger like domain | 325 | 431 | - | - | |
| Sto9g2966 | 1408 | ProSiteProfiles | Extended PHD (ePHD) domain profile. | 1120 | 1174 | IPR034732 | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Sto9g2966 | 264 | 442 | C2H2 Transcription Factor Family | AT3G14740 | 31.892 | 7.12e-15 | 75.9 |
Event-related genes