Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2939 ATGGCATTCGCATGggatgaagagagagagagagGCTCAGCTACGGTGATGATGCCCATGGATTTGGACACCATCCCTCAGCTTGACTTCTCCGGCTACAGCACCACCACAACAACCACTCCGACCTCCGATGGTGGTTGCAACTGGAACCAATGGTCTCCCGTCGTCAACTGGGACACCTTCAGCGCCGCCGGTCAAGACGACTTCCACGACCTCGTCCAGTCCATGATGGACATGGACGCTGCGGACGGCACCCGAGAAGAATTAGAAGGATTCACCTCCACGACGATGATGGAGGAAGAGGCAAGCGACGATTTCAAGGGTCTTAGGCTGGTGCACCTCCTCATGGCGGCTGCCGAGGCTCTCTCCGGCGCCAACGCCAGCCGTGATCTGGCTCGAGTGATATTGGTTCGGCTCAAGGAATTGGTTTCCCCCACCCAGGGCTCCAACATGGAGAGACTGGCGGCGTATTTTACGGAAGCCTTAGAGGGATTGGTAGAAGTAGAAGGCAGAGCAGCATACAATAAGCATTTCATAAGCGGTGGACCCCACCACCAGCCCACCGACATGCTGGCAGCCTTCCAGCTTCTCCAGGACATGTCCCCCTGCTTAAAGTTCGGGCACTTCACAGCCAATCAGGCCATCATGGAGGCGGTGGCCCAGGACAGGCGGATTCACATCGTGGACTATGACATCATGGAGGGAGTCCAGTGGGCCTCCTTGATCCAGGCCCTGTCCAGTACCAGAAAGGACGGCCCACACCTCAGGATCACCGCATTGTCAAGAAGCGGAGGCGGAAGAAGAAGTATGGGCACCGTGCAGGAAACGGGGCGTCGTTTGACGGCGTTCGCAGCGTCGGTGGGTCAAGCATTCTCGTTTCATCAATGCAGGCTGGAATCGGACGAAAGGTTTCGAGTATCGGGAGTGAAGATGGTTCGGGGAGAAGCGGTGGTGTTCAACTGCATGGTAGAGATGCCTCATCAAAGCTACAGGGCGCCGGAATCGGTGGCATCGTTCCTTGAGGAGGGGAAGAGTTTGAAGCCAAGAGTGGTGACAGTTGTGGAAGAGGAGGAAGGTGGGAGAATAGCAATGGGGGAAATGGGATTCGTGGGGAGGTTCATGGAGTCGTTGAATCATTTCTCGGCGGTGTGTGATTCGCTGGAGGCCGGCTTCCCGATGCAAAACAGGGCTGGGGCTCTGGCTCTGGTGGAGAGGGTATTTTTGGGCCCCAGAATAGTGGGTGCGTTGGGCCGGATTTACAGAAACAAGAAGAATAGAGGGTCGTGGGGGGAGTGGTTGGGTGAGGTCGGGTACAAGGGAGTTCCCATAAGCTTCACCAATCATTGTCAGTCTAAACTGCTATTGGGGTTGTTCAACGATGGGTATAGGGTGGAGGAGTTAGGTAGCAATAAGTTGGTGTTGAGTTGGAAATCCAGGCGTTTGCTTTCCGCCTCGGTTCCTTGTACTCTATCAAATCCCCAAATGAGATTCAAGCCCTATTCATTCTCCACTTTCCCGAAGCATTTCCACAGCTTCTTCGCCCCCTCTTTCACTAGAACTAGAACTTCTAATTCCCCATCTTTCCTTCCCACCATCACCATGTCCACCCTTTCCACTGAGAAAGACCCTGTTTCTACTCAGAATGACACCAGTCACAACACACACCAACCTTTGCAGGTTGCAAAGCGCTTAGAGAAGTTCAAAACAACCATCTTCACCCAAATGAGTATGCTTGCCATCAAACATGGAGCCATAAATCTTGGTCAAGGCTTTCCCAACTTTGATGGTCCAGAATTTGTAAAGGAAGCAGCAATTCAGGCTATTCGGGATGGGAAAAATCAGTATGCCCGGGGCTATGGAGTTCCAGACCTGAACTTCGCCATTGCAGATAGATTTAAGAGAGATACTGGAGTTGAAGTGGACCCTGAAAAGGAAGTTACTGTAACAAGTGGGTGCACCGAAGCAATTGCAGCGACTATGCTGGGATTAATAAATCCTGGTGACGAGGTTATCATGTTTGCTCCATTTTATGATTCTTATGAAGCCACTCTATCCATGGCTGGTGCAAATATAAAAGGTATAACCTTGCGCCCTCCAGATTTTGCTGTCCCCATTGAACAATTGAAGTCCACCATTTCAAAGAATACCCGTGCCATTATTATAAATACACCTCACAACCCTACTGGAAAGATGTTCACTAGGGAAGAACTCAATACCATTGCATCTCTTTGCATTGAGAATGACGTTCTGGTTTTCACTGACGAAGTTTACGATAAGTTGGCATTTGATATGGATCACATTTCCATGGCTTCTCTTCCAGGGATGTTTGAAAGAACAGTCACAATGAACTCCTTGGGGAAGACATTCTCCTTAACAGGATGGAAGATTGGATGGGCAATAGCACCTCCACACTTAACATGGGGAGTACGACAGGCACACTCTTTCCTGACTTTTGCCACCTCCACTCCTATGCAATGGGCAACTGCAGCAGCGCTAAGAGCCCCAGATTCTTACTTTGTGGAGCTAAAGAGAGACTATATGGCGAAAAGAGCTATTTTGGTGGAAGGACTGAAGGCTGTTGGTTTCAAGGTATTCCCATCCAGTGGAACTTACTTTGTGGTTGTTGATCACACACCTTTTGGACTGGAAAATGATGTTGCATTTTGCGAATATCTAATTAAGGAGGTGGGAGTGGTGGCAATTCCTACCAGTGTATTCTACTTAAATCCTGAAGAGGGGAAGAATCTAGTCAgatttactttctgcaaggatGAACAAACCTTAACGGCTGCTGTAGAGAGGATGAAGGAGAagcttaaaagaaaattttaa 2832 0.4905 MAFAWDEERERGSATVMMPMDLDTIPQLDFSGYSTTTTTTPTSDGGCNWNQWSPVVNWDTFSAAGQDDFHDLVQSMMDMDAADGTREELEGFTSTTMMEEEASDDFKGLRLVHLLMAAAEALSGANASRDLARVILVRLKELVSPTQGSNMERLAAYFTEALEGLVEVEGRAAYNKHFISGGPHHQPTDMLAAFQLLQDMSPCLKFGHFTANQAIMEAVAQDRRIHIVDYDIMEGVQWASLIQALSSTRKDGPHLRITALSRSGGGRRSMGTVQETGRRLTAFAASVGQAFSFHQCRLESDERFRVSGVKMVRGEAVVFNCMVEMPHQSYRAPESVASFLEEGKSLKPRVVTVVEEEEGGRIAMGEMGFVGRFMESLNHFSAVCDSLEAGFPMQNRAGALALVERVFLGPRIVGALGRIYRNKKNRGSWGEWLGEVGYKGVPISFTNHCQSKLLLGLFNDGYRVEELGSNKLVLSWKSRRLLSASVPCTLSNPQMRFKPYSFSTFPKHFHSFFAPSFTRTRTSNSPSFLPTITMSTLSTEKDPVSTQNDTSHNTHQPLQVAKRLEKFKTTIFTQMSMLAIKHGAINLGQGFPNFDGPEFVKEAAIQAIRDGKNQYARGYGVPDLNFAIADRFKRDTGVEVDPEKEVTVTSGCTEAIAATMLGLINPGDEVIMFAPFYDSYEATLSMAGANIKGITLRPPDFAVPIEQLKSTISKNTRAIIINTPHNPTGKMFTREELNTIASLCIENDVLVFTDEVYDKLAFDMDHISMASLPGMFERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWATAAALRAPDSYFVELKRDYMAKRAILVEGLKAVGFKVFPSSGTYFVVVDHTPFGLENDVAFCEYLIKEVGVVAIPTSVFYLNPEEGKNLVRFTFCKDEQTLTAAVERMKEKLKRKF 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2939 943 Gene3D Aspartate Aminotransferase, domain 1 574 935 IPR015422 GO:0003824
Sto9g2939 943 Pfam GRAS domain family 111 486 IPR005202 -
Sto9g2939 943 CDD AAT_like 585 937 - -
Sto9g2939 943 PANTHER FI04487P 560 941 - -
Sto9g2939 943 ProSiteProfiles GRAS family profile. 102 488 IPR005202 -
Sto9g2939 943 Pfam Aminotransferase class I and II 585 934 IPR004839 GO:0009058|GO:0030170
Sto9g2939 943 SUPERFAMILY PLP-dependent transferases 560 940 IPR015424 -
Sto9g2939 943 Gene3D - 597 835 IPR015421 GO:0003824
Sto9g2939 943 PANTHER FI04487P 560 941 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2939 Sto-Chr9 30568686 30580470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2939 105 485 GRAS Transcription Factor Family AT3G54220 35.052 9.17e-45 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sto9g2939 GRAS 1.9e-91 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2939 K23977 - gmx:100818968 759.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2939 9 30568686 30580470 Sto9g2939 9 30568686 30580470 ECH