Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2934 ATGGCCACTCTTCACTGCTTGCAATTCCTAATCATTCATCTCACTATCCACCTTCTATCGGTCTCTCTCCCCTCTGCAACTCCTCAACATCAAGAACAAGACACGCCCATCACTCGCTTCCAGAGCTACCTCAGAATTAATACGGCTCACCCACAACCTCACTATTCTTCCGCTGTCTCCTTCCTCATTTCTCAAGCACACTCCCTTGGCCTCCATTATCAAACTCTAGAGTTTTCACCCGGAAaacccctcctcctcctcacaTGGCCTGGCTCAAACCCTTCTCTCccctctcttctcttcaatTCCCATCTCGATTCTGTTCCTGCCGAACCCTCCAAGTGGCTCCACCCCCCTTTCTCTGCTGTCCTCACCCCTGACGGCAAGATATTTGCCCGTGGAGCCCAGGATGACAAGTGCATCGGTATGCAATACATTGAGGCTATTCGGAATTTGAAACACCAAAGTTTCACGCCTACTCGCACAATCCATGTGTCTTATGTGCCGGACGAGGAGATTGGTGGCCTAGATGGGGCTGCCAAGTTTGTGCAGTCCAAGCACTTCGACGATTTGAATGTTGGGTTCATGTTGGATGAAGGGCAGGCTTCGCCTGGTgacgagtttagggttttctacGCGGATAGGTCACCGTGGGGATTGAAAATCAAGGCAATGGGTCAACCAGGACATGGGTCGAGGATGTATGATAACAGTGCTATGGAGAATCTGATGAAGAGCATTGAAGTTATGAGCAGGTTTAGGGAAAGTCAATTTGATATGGTTAAGGCGGGCAAAGCTGCAAATTCCGAAGTTATTTCGGTTAATCCAGTTTATCTTAAAGCTGGGGTTGCTACAGTCTCTGGATTTGCAATGAATGTGCAACCTTCAGAAGCAGAAGCAGGCTTCGATCTTAGGTTGCCCCCTACAGCAAACCCCGAAGAAATCAAAAGAAGAATTGCTGAAGAATGGGTACCAGCTATTAGAAATATGTCATATGAGATAATAGAGAAAGGACCCATTAGAGACCACATGGGGCACCCTTTAATGACTCTAACTAATGCTTCCAATCCATGGTGGTTAGTATTCGAGCAGGCTATCACATCAGCTGGGGGAAAACTCGCAAAGCCTGAAATTCTTGCTTCAACAACAGATGCTCGGTACATACGACAGAAAGGAATTCCTGTACTTGGATTCTCACCAATGACAAATACTCCCATCTTGCTTCATGACCACAATGAGCACCTACAAGATACAGTGTATATGAAGGGAATAAAGGTATATGAGACTGTGATAAGGGATTTGATTCCTATAATTGTAGGACGAGACGAAGCTCAGACTCAGACCCACATGGATCTTGCCTCTTCATCTCCCAACAACCCATCCAAAGTAGAAATCCTTGAAATGGTGAAGAGAGAGCAGAAGATACAAACAGAGGCATCAAAGGGATTAATGCAATCAGATGGGAAAAAGAAGTACAAGGGAGTGAGGATGAGGAGCTGGGGATCATGGGTTTCAGAGATTAGAGCTCCAAACCAGAAAACAAGAATATGGTTAGGGTCTTATTCAACCCCTGAAGCTGCAGCCAGAGCCTATGATGCTGCACTTCTATGTCTTAAAGGCTCTTCAGCCAATCTCAATTTCCCattaacttcttcttcttcacactcACACTTCATTCCTCATGATGATCATACTCTCATGTCTCCTAAATCAATCCAAAGACTAGCTGCAGCAGCTGCCAATAGCTTCGTTGACAATGCCTCCACCACCACACCTTCTCCTCACCCTCCTGCCTCTGCTTCATCCTCACTAGTCTCCTCTCCCTCCGATCAAATCGATGATGATGTTTCACTAATCTCATCTTTTGGGGCCTACACTACTGCTGCTTCTGCTTGTGATGATCATACTAATGAACCTCTCTCATCCATGGACTATTGGTACAGCCTTGATGCTTTACAATCCCCAAAGTATGCGGATCAAATGTTCGGTGGGGGTTTGTTTGATATTGATTCAACCCAGATGATCGATGCTTTTTATGAAGAAAGTGATGATATTCGTTTGTGGAGCTTCTGCTGA 2076 0.4403 MATLHCLQFLIIHLTIHLLSVSLPSATPQHQEQDTPITRFQSYLRINTAHPQPHYSSAVSFLISQAHSLGLHYQTLEFSPGKPLLLLTWPGSNPSLPSLLFNSHLDSVPAEPSKWLHPPFSAVLTPDGKIFARGAQDDKCIGMQYIEAIRNLKHQSFTPTRTIHVSYVPDEEIGGLDGAAKFVQSKHFDDLNVGFMLDEGQASPGDEFRVFYADRSPWGLKIKAMGQPGHGSRMYDNSAMENLMKSIEVMSRFRESQFDMVKAGKAANSEVISVNPVYLKAGVATVSGFAMNVQPSEAEAGFDLRLPPTANPEEIKRRIAEEWVPAIRNMSYEIIEKGPIRDHMGHPLMTLTNASNPWWLVFEQAITSAGGKLAKPEILASTTDARYIRQKGIPVLGFSPMTNTPILLHDHNEHLQDTVYMKGIKVYETVIRDLIPIIVGRDEAQTQTHMDLASSSPNNPSKVEILEMVKREQKIQTEASKGLMQSDGKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTPEAAARAYDAALLCLKGSSANLNFPLTSSSSHSHFIPHDDHTLMSPKSIQRLAAAAANSFVDNASTTTPSPHPPASASSSLVSSPSDQIDDDVSLISSFGAYTTAASACDDHTNEPLSSMDYWYSLDALQSPKYADQMFGGGLFDIDSTQMIDAFYEESDDIRLWSFC 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2934 691 PANTHER PUTATIVE-RELATED 24 434 - -
Sto9g2934 691 Gene3D - 356 435 - -
Sto9g2934 691 MobiDBLite consensus disorder prediction 585 609 - -
Sto9g2934 691 SUPERFAMILY DNA-binding domain 491 549 IPR016177 GO:0003677
Sto9g2934 691 CDD AP2 490 548 IPR001471 GO:0003700|GO:0006355
Sto9g2934 691 CDD M20_AcylaseI_like 34 434 - -
Sto9g2934 691 Gene3D Zn peptidases 27 219 - -
Sto9g2934 691 TIGRFAM Ac-peptdase-euk: N-acyl-L-amino-acid amidohydrolase 30 433 IPR010159 GO:0004046|GO:0005737|GO:0006520
Sto9g2934 691 PRINTS Ethylene responsive element binding protein signature 492 503 IPR001471 GO:0003700|GO:0006355
Sto9g2934 691 PRINTS Ethylene responsive element binding protein signature 514 530 IPR001471 GO:0003700|GO:0006355
Sto9g2934 691 SMART rav1_2 491 554 IPR001471 GO:0003700|GO:0006355
Sto9g2934 691 Gene3D AP2/ERF domain 490 550 IPR036955 GO:0003700|GO:0006355
Sto9g2934 691 Pfam Peptidase family M20/M25/M40 100 432 IPR002933 GO:0016787
Sto9g2934 691 PANTHER AMINOACYLASE-1 24 434 - -
Sto9g2934 691 Pfam AP2 domain 491 540 IPR001471 GO:0003700|GO:0006355
Sto9g2934 691 Gene3D - 220 329 - -
Sto9g2934 691 ProSiteProfiles AP2/ERF domain profile. 491 548 IPR001471 GO:0003700|GO:0006355
Sto9g2934 691 SUPERFAMILY Zn-dependent exopeptidases 33 435 - -
Sto9g2934 691 Pfam Peptidase dimerisation domain 215 321 IPR011650 -
Sto9g2934 691 SUPERFAMILY Bacterial exopeptidase dimerisation domain 219 322 IPR036264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2934 Sto-Chr9 30538036 30546448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2934 468 690 AP2-EREBP Transcription Factor Family AT1G21910 46.923 9.20e-49 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Sto9g2934 Peptidase_M20 4.1e-34 CL0035
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2934 K14677 - vvi:100257526 666.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2934 9 30538036 30546448 Sto9g2934 9 30538036 30546448 ECH