Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2905 CTGGGAAAGCAAttggaggaagaagatgaagaaaagagTTTTCATGTGCTGGCAGTGGATGATAGTGTGATCGACAGGAAGCTTCTGGAGAGGCTGCTTACACTTCTTTCTTCATGCAAAGTAACGTGTGTGGAGTCTGGGGATAAAGCTTTGAAATATCTTGGTCTGCTTGATGACGACCTCCATATTCAAAATGCCTGCTCTTCCACCAATTCCCAAATATCCTCATCTTCTTTTGTGGAAATGCAGGGATTAAAAGTGAACATGATCATGACAGACTACTGCATGCCTGGGATGAGTGGCTATGATTTACTTAAACGACTCAAGGGATCTTCTAATTGGAAAGATGTACCCGTCGTCGTTATGTCATCAGAAAACGTACCTTCTAGAATCAACATgtgcttAGAAGGAGGAGCAGAGGAGTTTCTATTGAAGCCTCTTCAGTTATCAGATTTAAAGAAGCTTGAGCCTTACTTTCTGAAATCCCTCGACAATTCTTCAAGTAGTGATCAAGAGTGTGCTAACATTTCCATAGCAATTGACGATGATGATCACAACAATTGCACTAATAGTTTTGCCAAAAGGAAGGCACTTTCACCACCAGAACCTCCAAAGAGATCAAGACCCAATATCAAAGGATTAGCAGTGCTCtaa 654 0.3945 LGKQLEEEDEEKSFHVLAVDDSVIDRKLLERLLTLLSSCKVTCVESGDKALKYLGLLDDDLHIQNACSSTNSQISSSSFVEMQGLKVNMIMTDYCMPGMSGYDLLKRLKGSSNWKDVPVVVMSSENVPSRINMCLEGGAEEFLLKPLQLSDLKKLEPYFLKSLDNSSSSDQECANISIAIDDDDHNNCTNSFAKRKALSPPEPPKRSRPNIKGLAVL 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2905 217 SMART REC_2 14 156 IPR001789 GO:0000160
Sto9g2905 217 Gene3D - 15 186 - -
Sto9g2905 217 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 216 IPR045279 GO:0009736
Sto9g2905 217 PANTHER TWO-COMPONENT RESPONSE REGULATOR ORR4 4 216 - -
Sto9g2905 217 SUPERFAMILY CheY-like 13 154 IPR011006 -
Sto9g2905 217 MobiDBLite consensus disorder prediction 193 217 - -
Sto9g2905 217 Pfam Response regulator receiver domain 81 154 IPR001789 GO:0000160
Sto9g2905 217 ProSiteProfiles Response regulatory domain profile. 15 160 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2905 Sto-Chr9 30327373 30329095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2905 11 162 Response Regulator Gene Family AT3G57040 57.237 9.86e-57 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sto9g2905 Response_reg 2.1e-14 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2905 K14492 - gmx:100801334 248.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2905 9 30327373 30329095 Sto9g2905 9 30327373 30329095 ECH