Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2882 ATGTCAAACCAGAATCGTCGGCCATCGTTTTCGTCGTCGACGACGTCGTCATTGGCAAAACGGCATGCCTCATTGTCGGAGAATGCGGGGAAGGCTATGGCGGCTCCTCCACACTTGTCTAAGAAGAAGCGAGCACCTCTCAGTAACCTCACTAATCAAAAGAATGCTTCTCACGCTGGTTTGCGCAAGTCAATGCCATCAGCTACTCTGGTACATTGCACGAGTAAAATTACTCAGACAAAGAAGAATTTCCCCGCGTGCACCAGTAGCTCCGCAATTTCCGTTAATAAAGTAGCTGCTTTGTCGAATGTTGAATCAAGGGCAGTTGTTTTCCCTTCTCTACCACAAAGGGATGAAGCTGTTAGTAAATCAGATGAAATGTCTGTTTCTTCAGACGACACAATTTCTCACTCTTTCAAGAGTCCTGAAATTGAATATATTGATAACAGTCCTATTGACAGGAAGACATTCAGCAATCTCAACATCTCAGATACTTCGGACCCAACAGGCAACGTTTGTAGTAGAGATTTACTTGTTGATTTGGAAAGAGATGACAAAATTATCAATATCGACAACAATTACATCGACCCTCAGCTATGTGCAACCTTTTCTTGTGATATCTACCAGCATTTACGTGCATCTGAGGCAAAGAAAAGGCCCTCCACTGATTTCATGGAGAGAATTCAGAAGGACATAAATCCCAACATGCGTGCTATATTAATTGATTGGCTTGTGGAGGTGGCTGAAGAGTATCGACTGGTGCCTGATACATTATATTTGACAGTTAACTACATTGATCGATATCTCTCAGGGAATGCCATGAATAGGCAAAAGTTGCAATTACTTGGTGTTGCCTGCATGATGATTGCCTCTAAATATGAGGAGATTTGTGCACCTCAGGTGGAGGAATATTGTTATATAACTGATAACACATACTTCAAAGAAGAGGTTTTGCAAATGGAATCTGCTGTCCTAAATTATTTGAAGTTCGAAATGACAGCCCCAACAACTAAATGCTTTTTAAGACGATTTGTTCGTGCAGCTCAAGGAGTTAGTGAGGTGCCATCATTGCAATTAGAGTGCTTGACCAATTATATTGCAGAATTGTCTTTACTGGAGTACAATATGCTTTGTTATGCTCCATCACTTGTAGCTGCTTCTGCAATTTTCTTGGCCAAATTTATCCTTTTCCCTTCAAAGAAACCATGGAATTCAACATTGCAGCATTATGCACTCTACCAGGCTTCTGACTTGTGTGACTGTGTAAAGGATCTCCATCGTCTGTGTTTTAATAGCCATAATTCCAACTTACCAGCGATCCGGGATAAATACAGTCAGCACAAGTACAAATATGTGGCAAAGAAGTTCATCCCTCCATCAATACCTCCAGAATTTTTCCAGAAATGA 1407 0.4122 MSNQNRRPSFSSSTTSSLAKRHASLSENAGKAMAAPPHLSKKKRAPLSNLTNQKNASHAGLRKSMPSATLVHCTSKITQTKKNFPACTSSSAISVNKVAALSNVESRAVVFPSLPQRDEAVSKSDEMSVSSDDTISHSFKSPEIEYIDNSPIDRKTFSNLNISDTSDPTGNVCSRDLLVDLERDDKIINIDNNYIDPQLCATFSCDIYQHLRASEAKKRPSTDFMERIQKDINPNMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNAMNRQKLQLLGVACMMIASKYEEICAPQVEEYCYITDNTYFKEEVLQMESAVLNYLKFEMTAPTTKCFLRRFVRAAQGVSEVPSLQLECLTNYIAELSLLEYNMLCYAPSLVAASAIFLAKFILFPSKKPWNSTLQHYALYQASDLCDCVKDLHRLCFNSHNSNLPAIRDKYSQHKYKYVAKKFIPPSIPPEFFQK 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2882 468 ProSitePatterns Cyclins signature. 237 268 IPR006671 -
Sto9g2882 468 PANTHER CYCLINS 38 467 IPR039361 -
Sto9g2882 468 PIRSF Cyclin_A_B_D_E 1 461 IPR039361 -
Sto9g2882 468 Gene3D - 206 454 - -
Sto9g2882 468 MobiDBLite consensus disorder prediction 45 64 - -
Sto9g2882 468 PANTHER CYCLIN-A1-1 38 467 - -
Sto9g2882 468 SMART cyclin_7 242 326 IPR013763 -
Sto9g2882 468 SMART cyclin_7 339 427 IPR013763 -
Sto9g2882 468 MobiDBLite consensus disorder prediction 1 23 - -
Sto9g2882 468 CDD CYCLIN 236 325 IPR013763 -
Sto9g2882 468 Pfam Cyclin, C-terminal domain 335 454 IPR004367 -
Sto9g2882 468 Gene3D - 220 333 - -
Sto9g2882 468 CDD CYCLIN 333 426 IPR013763 -
Sto9g2882 468 SUPERFAMILY Cyclin-like 196 332 IPR036915 -
Sto9g2882 468 SMART Cyclin_C_2 335 460 IPR004367 -
Sto9g2882 468 SUPERFAMILY Cyclin-like 335 460 IPR036915 -
Sto9g2882 468 MobiDBLite consensus disorder prediction 1 64 - -
Sto9g2882 468 Pfam Cyclin, N-terminal domain 206 332 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2882 Sto-Chr9 30196282 30198877 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2882 1 466 Core Cell Cycle Gene Families AT1G44110 63.333 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2882 K06627 - mnt:21396560 668.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2882 9 30196282 30198877 Sto9g2882 9 30196282 30198877 ECH