Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2881 ATGTCTACTCAGAATCGTCGTCCATCGTTTTCCTCTTCGACGACGTCGTCTTTAGCAAAGCGGCATGCATCGTCGGAGAATGTAGGCAAGGCTACGGCGGCGCCTCCACACTTGGCTAAGAAGCGGGCGCCTCTCAGTAACCTCACAAATCAAAAGATTGCGTCTCACAGTGCTTCGCGGAACTCATTGCCATCATCTACTTCGGTACCATGCACGACTAAACTTGCAAAGACAAAGAAGAATTTCCCTACAAGCAGCGGAAGCTCAGCAATTTCCGGAAACAAAGTAGGTGCTTTGTCAAATGTTGAATCAAAGGTTGAGTTCACTTGTTTTCCACCAAAGGATGAAGCTGCTCCTCCAACTGTTACTGTTACTTCTTCAATTAGCATGGATACTACTTCTCCTAGTAAATCAGATGGAATGTCTTTGGATGAGACAATGTCTACCTCTACCTGTGATTCTTTCAAGAGTCCTCAAATTGAGTATATTGACAATACTGATGTTTCAGCTCTAGACTCTATTGACAGAAACACATTCAGCAATCTCAACATCTCAGATACTACAGAGACACCAGGCAACATTTGTAGTAGAGACATACTTGTTGATTTTGAAAAAGATGACAAAATTATCAATATCGACAACAATTACACGGATCCCCAGCTCTGTGCTACCTTTGCTTGTGATATCTACAAGCACTTGCGTGCATCTGAGGCAAAGAAAAGGCCTTCCACAGATTTCATGGAGAGAATTCAGAAGGATGTAAATTCCAACATGCGCGCTATACTAATTGACTGGCTCGTGGAGGTGGCTGAAGAGTATCGTCTTGTGCCTGATACATTGTATTTGACAGTGAACTACATAGATCGATATCTTTCAGGGAATGTCATGAATAGGCAGAAGTTACAATTGCTTGGTGTTGCCTGCATGATGATTGCAGCTAAATATGAGGAGATCTGTGCACCCCAGGTGGAGGAATACTGTTACATAACTGATAACACATACTTCAAGGAAGAGGTTTTGCAAATGGAATCTGCGGTCTTGAATTATCTTAAGTTCGAAATGACAGCCCCCACAACTAAATGTTTCTTAAGACGGTTTGTTCGTGCAGCTCAAGGAGTCAATGAGGTGCCATCATTCCAATTAGAGTGCTTGACCAACTATATTGCTGAATTGTCCCTACTGGAGTACAGTATGCTTTGTTATGCTCCATCACTTATAGCTGCCTCTGCAATTTTCCTGgccaaatttataatttcccCTTCAATAAAACCATGGAATTCCACATTACAGCATTACACACTGTATGAAGCTTGTGATTTGTGTGATTGTGTGAAGGATCTTCATCGTTTGTGTCTTGACGGCCTTAATTCTAGTTTACCTGCAATCCGGGAGAAATACAGTCAGCACAAGTACAAATACGTGGCAAAGAAGTTCATCCCTCTATCAATACCTCCAGAATTTTTCCTTAGTTGA 1473 0.4162 MSTQNRRPSFSSSTTSSLAKRHASSENVGKATAAPPHLAKKRAPLSNLTNQKIASHSASRNSLPSSTSVPCTTKLAKTKKNFPTSSGSSAISGNKVGALSNVESKVEFTCFPPKDEAAPPTVTVTSSISMDTTSPSKSDGMSLDETMSTSTCDSFKSPQIEYIDNTDVSALDSIDRNTFSNLNISDTTETPGNICSRDILVDFEKDDKIINIDNNYTDPQLCATFACDIYKHLRASEAKKRPSTDFMERIQKDVNSNMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNVMNRQKLQLLGVACMMIAAKYEEICAPQVEEYCYITDNTYFKEEVLQMESAVLNYLKFEMTAPTTKCFLRRFVRAAQGVNEVPSFQLECLTNYIAELSLLEYSMLCYAPSLIAASAIFLAKFIISPSIKPWNSTLQHYTLYEACDLCDCVKDLHRLCLDGLNSSLPAIREKYSQHKYKYVAKKFIPLSIPPEFFLS 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2881 490 SMART Cyclin_C_2 357 480 IPR004367 -
Sto9g2881 490 MobiDBLite consensus disorder prediction 44 70 - -
Sto9g2881 490 CDD CYCLIN 355 448 IPR013763 -
Sto9g2881 490 PIRSF Cyclin_A_B_D_E 1 483 IPR039361 -
Sto9g2881 490 MobiDBLite consensus disorder prediction 120 151 - -
Sto9g2881 490 ProSitePatterns Cyclins signature. 259 290 IPR006671 -
Sto9g2881 490 SMART cyclin_7 361 449 IPR013763 -
Sto9g2881 490 SMART cyclin_7 264 348 IPR013763 -
Sto9g2881 490 MobiDBLite consensus disorder prediction 1 70 - -
Sto9g2881 490 MobiDBLite consensus disorder prediction 1 23 - -
Sto9g2881 490 Pfam Cyclin, N-terminal domain 228 354 IPR006671 -
Sto9g2881 490 Pfam Cyclin, C-terminal domain 357 476 IPR004367 -
Sto9g2881 490 SUPERFAMILY Cyclin-like 217 354 IPR036915 -
Sto9g2881 490 CDD CYCLIN 258 347 IPR013763 -
Sto9g2881 490 SUPERFAMILY Cyclin-like 357 479 IPR036915 -
Sto9g2881 490 Gene3D - 242 355 - -
Sto9g2881 490 Gene3D - 228 476 - -
Sto9g2881 490 PANTHER CYCLIN-A1-1 30 488 - -
Sto9g2881 490 MobiDBLite consensus disorder prediction 119 151 - -
Sto9g2881 490 PANTHER CYCLINS 30 488 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2881 Sto-Chr9 30191150 30194546 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2881 4 488 Core Cell Cycle Gene Families AT1G44110 65.173 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2881 K06627 - qsu:112028095 716.457