Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2875 ATGAACATAACCCTTACAACAATCACCTCAAATGCGTTGTCTGTGGCTGCCACCGCAATTTCCACCACCGCGAACCCGACGAGCCTATTTCCACAACCCATGTCATTGAGCATCAGCCCCACCACCGGCATCACCCTCATCCGCCTCCTCCCTTTCAAGCATCGAATCGGAGCCCCAATTCAGCTTCCCCGCCTACAATCTCCTCATCCAGTACCCCTCCGCACTCCACATACTTCTGGCATTCTCCGCTGGCCTTTCGACTCACCCGGAGAGCACGACGGCTCCCACCCCACGGATTGGGGACGCCAAGCTCAAATACGATTTTGTGGCTTCACCATCATGGTTAAGCCATTCATCCTCCTAATTTCCTTCCTCATCTTCATCTTTTCCCTTCCTTCTTTTTCCTCTTCTTCATGCCTCTTCGATCTCTCCTACGTCCAAACCTTCCCTTGGGACACTTCAACTTGCCATTCCAACAATGGAACCCAATGTTGCCAAACCCTCCTCAGCCTCTTCGGTATGGGACTTGCTCAACACCTCAAAGACACCTCTGTCTTCGAACTTCCCGATGTTAACTCTTCCTCTTCCTGCCTCTCCGATTTCAGAGACCAACTTGCTTCTATGTCGATCGACCCCAGTTTGGTCAATACTTGCTTCCAAAACTCCACTCAGTTTGTCTCCAATTCTTCAAGCTGTGCAGGAATTATAACCGCCAAAGATTTCACTTCCAAGGTAGGCATGATGACCCCTTTAGATACATCTTGTAAAGGGGATCTCTCTGCTCTTACTCTATGTGGGGTTTGCCTTGATGCTGGAATGAAAGTTAGTTCCCAATTGACTGCTATTGACCCAAATAGCACCAAATGTTTCTACTTCACAGTTTTATATGCTTCTGCTCTTGTCAACCAGTATGGTCCCAAAGATGTCAGATCAGCCTCTTGCATACTTGGAATGCCTCTGTCTACTTCTGCAGAAGGGTCTAAAAAAGAACGGATTTTGAAGCTGACTTTTGGGTTGTTGGGTGGTGTGGTTGGTGTTCTTCTTGCTTTTGGCCTGCTTCTTGTGTATAGGAAGTGGGATAAGACAAGGAGGGAGAATATTTATCACAGAGGAGTTGTGAGCAGTGTGAGAGCTAGTGTTTTGCCTTATACAGGTGCAAAATGGTTCCATTTGTCTGAGCTTGAGAAGGCCACTGATAAATTCTCTCAGAGGAATTTAGTTGGTCAAGGATCTGATGGGGTTGTATACAAAGGGACTCTTCGAGATGGCACGTTGGTGGCAGTTAAGGAAATTTTTGACTTGGAAACCAAAGGGGATGAAGAGTTCTGCTATGAAGTGGAGATTATAAGCAAAATTAAGCACAGGAATCTCGTTGCTCTGAGAGGTTGTTGTGTTACGAGTGATAATTTAAAAGGTAAGagaaggtttttggtttatgattATATGTCTAATAACAGCCTGAGTCACCAACTATCTCTTTCTGGGGCTAATAGGCCGCTCACATGGCCACAGAGAAAGAACATACTTCTGGATGTGGCTAAAGGGCTTGCTTATTTGCATTACGAAATCAAACCCCCAATTTATCATCGTGACATAAAGGCTAATAATATCCTTCTAGACTCCACAATGAAAGCCAAAGTAGCCGATTTTGGATTGGCCAAACAAGGGAATGAAGGGCAGTCTCATCTCACCACAAGGGTTGCTGGCACGTACGGTTATCTAGCACCAGAGTATGCTCTTTATGGACAACTAACGGACAAGAGTGATGTGTACAGTTTTGGTATTGTGATTCTTGAAGTGATGAGTGGAAGAAAAGTGCTTGATACTTCAAACTCTTCGGTTGTTTTGATCACAGATTGGGCTTGGACGCATGCAAAATCAGGGAATATAGAGGAAATACTGGATGCCTCAATAAGAGAAGGAGGGCCAAAAAGGATAATGGAAAGATTTGTTCTTGTTGGGATTCTTTGTGCTCACGTTATGGTGGCATTGAGGCCTACTATTTCTGAGGCCCTCAAGATGTTAGAAGGTGATATTGACATTCCCAATTTACCAGATAGACCAGTGCCTCTTGGCCACGAGTCCTTTCAATCTTCTCTCTTGTATGGTTTACAAAGCAGTGGAAGATCTACACCGTTTAGTTCATCGGTTCAATCTTTCAAGTATGAGCACAATATTAGATTGCCTTTGGATCATCAGAATTAG 2205 0.4454 MNITLTTITSNALSVAATAISTTANPTSLFPQPMSLSISPTTGITLIRLLPFKHRIGAPIQLPRLQSPHPVPLRTPHTSGILRWPFDSPGEHDGSHPTDWGRQAQIRFCGFTIMVKPFILLISFLIFIFSLPSFSSSSCLFDLSYVQTFPWDTSTCHSNNGTQCCQTLLSLFGMGLAQHLKDTSVFELPDVNSSSSCLSDFRDQLASMSIDPSLVNTCFQNSTQFVSNSSSCAGIITAKDFTSKVGMMTPLDTSCKGDLSALTLCGVCLDAGMKVSSQLTAIDPNSTKCFYFTVLYASALVNQYGPKDVRSASCILGMPLSTSAEGSKKERILKLTFGLLGGVVGVLLAFGLLLVYRKWDKTRRENIYHRGVVSSVRASVLPYTGAKWFHLSELEKATDKFSQRNLVGQGSDGVVYKGTLRDGTLVAVKEIFDLETKGDEEFCYEVEIISKIKHRNLVALRGCCVTSDNLKGKRRFLVYDYMSNNSLSHQLSLSGANRPLTWPQRKNILLDVAKGLAYLHYEIKPPIYHRDIKANNILLDSTMKAKVADFGLAKQGNEGQSHLTTRVAGTYGYLAPEYALYGQLTDKSDVYSFGIVILEVMSGRKVLDTSNSSVVLITDWAWTHAKSGNIEEILDASIREGGPKRIMERFVLVGILCAHVMVALRPTISEALKMLEGDIDIPNLPDRPVPLGHESFQSSLLYGLQSSGRSTPFSSSVQSFKYEHNIRLPLDHQN 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2875 734 Gene3D Transferase(Phosphotransferase) domain 1 482 681 - -
Sto9g2875 734 PANTHER OS01G0253100 PROTEIN 133 702 IPR045271 GO:0004714|GO:0006468
Sto9g2875 734 SUPERFAMILY Protein kinase-like (PK-like) 385 695 IPR011009 -
Sto9g2875 734 ProSitePatterns Serine/Threonine protein kinases active-site signature. 527 539 IPR008271 GO:0004672|GO:0006468
Sto9g2875 734 ProSiteProfiles Protein kinase domain profile. 401 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2875 734 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 133 702 - -
Sto9g2875 734 SMART serkin_6 401 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2875 734 CDD STKc_IRAK 407 677 - -
Sto9g2875 734 Pfam SPARK 135 289 IPR043891 -
Sto9g2875 734 Gene3D Phosphorylase Kinase; domain 1 368 481 - -
Sto9g2875 734 Pfam Protein kinase domain 403 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2875 Sto-Chr9 30158054 30162221 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2875 136 697 Receptor kinase-like Gene Family AT1G11050 51.635 0.0 576
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Sto9g2875 Pkinase 5.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2875 - - ccaj:109788171 867.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2875 9 30158054 30162221 Sto9g2875 9 30158054 30162221 ECH