Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2844 ATGGCATCGTCATCGAATTCACCATGCGCGGCGTGTAAGTTTCTGCGACGGAAGTGCCAACCGGAGTGCGTGTTTGCACCGTACTTCCCGCCGGATCAGCCGCAGAAATTCGCCAACGTGCACAAAGTATTCGGAGCGAGCAACGTGACGAAGCTGCTGAACGAGTTACACCCTCACCAGCGTGAAGACGCGGTGAACTCACTGGCGTACGAGGCGGACATGCGGCTCCGCGACCCCGTCTACGGCTGCGTGGGCGTCATCTCTCTCCTCCAACACCAACTGCGTCAACTCCAGATGGACCTCACCTGCGCCAAGTCGGAGCTGTCGAGGTACCAGACGTTGGGCATCTCCTCGCACGCGCACGGGCTGCTTCACCAGGCCCAAAACATAGGGATGGGCATCAATCTGATCGGAGGGGCGGGATCACGTGAGcaccactaccaccaccaccaccaccagttCTTTCCGCGGGACCACCAGGCGCCTGTGAATGTGGCCAACTATGACGCTGCTCTCTTGTCCATGAACGTCTCTGCCAGCATAGGCCAGCTCAGTCAGTTTCAGCAGCCCAGAGCTGCCGCTGGGGACGACGTGGGAAGGAATAGGATTCAACATGGGATGGGAGAGATAGAGAACCTCATATCTTAA 648 0.5586 MASSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQMDLTCAKSELSRYQTLGISSHAHGLLHQAQNIGMGINLIGGAGSREHHYHHHHHQFFPRDHQAPVNVANYDAALLSMNVSASIGQLSQFQQPRAAAGDDVGRNRIQHGMGEIENLIS 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2844 215 Pfam Lateral organ boundaries (LOB) domain 8 105 IPR004883 -
Sto9g2844 215 Coils Coil 87 114 - -
Sto9g2844 215 PANTHER LOB DOMAIN-CONTAINING PROTEIN 6-LIKE 3 163 - -
Sto9g2844 215 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 163 - -
Sto9g2844 215 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2844 Sto-Chr9 29948103 29949100 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2844 2 203 AS2 family AT1G65620 69.856 2.55e-87 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sto9g2844 LOB 3.1e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2844 - - tcc:18598717 311.997