Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2842 ATGAAAGTGTGGCTAATTTTATTATCCGCAATAGCAATAGCAGCGGCCGTAGCCGAAGCTCAATCCCTCGAAGGTTGCCCCAACAAATGTGGAGATGTTGAAATCCCTTATCCATTTGGTGTGGGTCAGCAACGTGGGACTTCTCGCAACTGCTTCTTGGAGAAATCGTTTAGTCTCACTTGTGAGGATTCCACCTTATTCGCCGGAATTAACATCCTAGTTTCTACCATATCCCTCCAAGGTTCTCTAGAAATCGCCATGTTTGTGTCCCGAAACTGTTTCAATGAATCAGGAATAGAAGTCGAAGACCGTACAGCCTTTCTCACCATCTCTGCTTTCACCATTTCCAGCACAGCCAACAAGTTCATCACCATTGGCTGCGACACTTACTCCAAATTAATTGCTACCAACAATTATCAAACTTCTGTCACCGGCTGCATTACCCAATGTGACGCCATTCCTGATTCCCACAACAGACAAAAGTGTTCGGGGATTGGGTGTTGCCAGGTGGATATTCCTCTTGGGATGAGGAACATCACTTTGGAATCTTTTAGTTTCGACGCCCATTCCCGAGTGTTGGATTTCAACAACTGTAGCTATGCTTTCGTGGCCAAACAAGGCTGGTTTAATTTCTCCCTTGATCATCTTTACCATTTTCCCTTTGACAAGACCCCTTTCATCGTTGATTGGACTGTTTCCAACGTTACTTGTAAAATTGCCAAAACTAGATCAGACTATGCTTGCACTTCCAACACCTATTGTGCTGACTCCATAGATGGATTTGGGTATAACTGCAGATGCAACCCCGGGTTTGAAGGAAACCCATACCATCCCGATGGCTGCCGTGACATAGACGAATGTCAGGAATCCACACATACTTGCCTAAGTCAAGCAAATTGTCGAAACACGTTTGGGTCTTTCGAATGTTTCTGTCCACCTGATTTCTCTGGGAATGGAACCTTGGCAGCAAGATGCGAGGCGCCCTTCTCTAAAAATCCACTCACACCTGTTCTCGCTGGTACAAGTGCAGGGTTTCTAGCCATTATTGTAGGAATGTCCTGGCTGTACTTGGTGTACCAGAAGAGGAAGCTCATCAAATTAAAGCACAGATTTTTTAGTCAGAATGGTGGCTACATTCTGCAGCAACAACTCTCAGTGAAAGAAACCCAAACAGCTAAAATTTTCACAGCAGAGGAGTTGAAAAAGGCAACTAACAACTACGATGACAGCTTAATCATTGGGAAAGGAGGTTTTGGTACTGTTTATAAAGGACATCTCACAGACAACACAATCGTGGCAATCAAGAAGTCCAAGGTAGTAGATCAAAGCCAAATTGAACAGTTCATTAACGAGGTGGTTGTACTCTCCCAAATCAATCATAGGAATGTGGTCAAACTCCTAGGCTGTTGTTTGGAAACTGAGGTTCCTCTTCTGGTTTATGAATTCGTTAACAACGGCACCGTCTATGACTACATTCACAACAAAACCAACAACTCCAATATCACTTGGGAGACACGTTTAAGGATAGCAGCTGAAGCAGCAGGAGCATTAACATATCTACACTCTGCTGCCTCCATACCCATAATCCATAGAGATGTCAAAACCTCAAACATTCTTCTAGATGAGACTTACACCGCTAAAGTCTCCGACTTTGGAGCTTCTAGATTGGTTCCACTTGATGAAACTGGCCAATTAGCCACAATTGTAACAGGAACTTTAGGATACTTGGACCCAGAATACATGCAGACAAACCAACTCACTGTGAAGAGCGATGTGTATAGTTTTGGTGTGGTATTGGCGGAGCTACTAACAGGGAAGAAAGCACTTTCATTTGATAGGTCGGAAGAGGAAAGAAATCTTGCAATGCACTTCCTTTCTTACTTGAATCGGGGTCACTTGTTTGAAATAGTTGAAGTTGGGTTAGTGAATGAGGAAAATAAGCAGAGAATCCATGATGTGGGTGTGCTTGCAGCAAGGTGTATGAGAATTAAAGGAGAGGAGAGACCTAGTATGAAGGAAGTGGCGATGGAGTTGGAGGGAATTATAAGGATGAAAAGGAAGCATCCATGGGTGAAGGAAAACGTTAATTTGAAAGAAAGTGAAGCGTTGCTTTGTGAGATATCTGATTCAAATGAAAATGAGGATAGCAGCAGTAGTCACAGTAACACTGAATTGGATAGCACTACGGATCATGTGCTAATTAACTTAAATGATGACAAACATCGTTACTGGGAATGA 2238 0.4307 MKVWLILLSAIAIAAAVAEAQSLEGCPNKCGDVEIPYPFGVGQQRGTSRNCFLEKSFSLTCEDSTLFAGINILVSTISLQGSLEIAMFVSRNCFNESGIEVEDRTAFLTISAFTISSTANKFITIGCDTYSKLIATNNYQTSVTGCITQCDAIPDSHNRQKCSGIGCCQVDIPLGMRNITLESFSFDAHSRVLDFNNCSYAFVAKQGWFNFSLDHLYHFPFDKTPFIVDWTVSNVTCKIAKTRSDYACTSNTYCADSIDGFGYNCRCNPGFEGNPYHPDGCRDIDECQESTHTCLSQANCRNTFGSFECFCPPDFSGNGTLAARCEAPFSKNPLTPVLAGTSAGFLAIIVGMSWLYLVYQKRKLIKLKHRFFSQNGGYILQQQLSVKETQTAKIFTAEELKKATNNYDDSLIIGKGGFGTVYKGHLTDNTIVAIKKSKVVDQSQIEQFINEVVVLSQINHRNVVKLLGCCLETEVPLLVYEFVNNGTVYDYIHNKTNNSNITWETRLRIAAEAAGALTYLHSAASIPIIHRDVKTSNILLDETYTAKVSDFGASRLVPLDETGQLATIVTGTLGYLDPEYMQTNQLTVKSDVYSFGVVLAELLTGKKALSFDRSEEERNLAMHFLSYLNRGHLFEIVEVGLVNEENKQRIHDVGVLAARCMRIKGEERPSMKEVAMELEGIIRMKRKHPWVKENVNLKESEALLCEISDSNENEDSSSSHSNTELDSTTDHVLINLNDDKHRYWE 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2842 745 ProSitePatterns Calcium-binding EGF-like domain signature. 283 309 IPR018097 GO:0005509
Sto9g2842 745 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 8 710 IPR045274 GO:0007166
Sto9g2842 745 ProSitePatterns Protein kinases ATP-binding region signature. 413 436 IPR017441 GO:0005524
Sto9g2842 745 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 8 710 - -
Sto9g2842 745 Gene3D Laminin 285 327 - -
Sto9g2842 745 SMART egf_5 286 326 IPR000742 -
Sto9g2842 745 SMART egf_5 236 282 IPR000742 -
Sto9g2842 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 528 540 IPR008271 GO:0004672|GO:0006468
Sto9g2842 745 SUPERFAMILY EGF/Laminin 283 319 - -
Sto9g2842 745 ProSiteProfiles Protein kinase domain profile. 407 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2842 745 Gene3D Phosphorylase Kinase; domain 1 373 482 - -
Sto9g2842 745 Pfam Calcium-binding EGF domain 283 325 IPR001881 GO:0005509
Sto9g2842 745 Gene3D Transferase(Phosphotransferase) domain 1 483 702 - -
Sto9g2842 745 Pfam Protein tyrosine and serine/threonine kinase 413 678 IPR001245 GO:0004672|GO:0006468
Sto9g2842 745 Gene3D Laminin 236 284 - -
Sto9g2842 745 MobiDBLite consensus disorder prediction 709 732 - -
Sto9g2842 745 SMART egfca_6 283 326 IPR001881 GO:0005509
Sto9g2842 745 SUPERFAMILY Protein kinase-like (PK-like) 393 702 IPR011009 -
Sto9g2842 745 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 300 311 IPR000152 -
Sto9g2842 745 SMART serkin_6 407 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2842 745 ProSiteProfiles EGF-like domain profile. 283 326 IPR000742 -
Sto9g2842 745 Pfam Wall-associated receptor kinase galacturonan-binding 26 81 IPR025287 GO:0030247
Sto9g2842 745 CDD STKc_IRAK 413 681 - -
Sto9g2842 745 CDD EGF_CA 283 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2842 Sto-Chr9 29938177 29940609 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2842 1 704 Receptor kinase-like Gene Family AT1G21230 46.732 0.0 601
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Sto9g2842 PK_Tyr_Ser-Thr 2.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2842 - - gmx:100779983 856.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2842 9 29938177 29940609 Sto5g0345 5 2073031 2075506 CCT