Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2841 ATGCACATTGAAAGCCTCCTATTATGCCTGATTCTGTTGGCAATCACGGAAGTAGTAGTAAATCAATCTCTGCCTGGCTGCCCCAACAAATGTGGAGACGTTGAGATTCCCTATCCATTTGGTGTGGGTCACCAATCTGGTACTGGAAACAAGTGCTTCTTAGAGGAAGAGACTTTTAGTCTGTCTTGTGATGAAAACTCCAAATTATGGCATCGAAACGTCGAAATCTCAAGCATATCTGTCAGAGGTCATATGGACATGTCCATGAATGTGTCTCGTGTATGCTACGATGGATCAGGGAGAGTATTAACCGAAAATGCAGCATATCTGACAACCCCTGCATTCACCATTTCTAGCAAGGAGAACAAGTTCACGAGTGTTGGGTGCGACACCTACGGCTATATCCTAGGTTCCCAGAGCAGTGGGAGTGCATATGGGTCTTATGCCACCGGTTGCTTAACCAAATGTAACACAATTCCCAACGAAGAGAACGGTGAGAGCTGTTCAGGGGTTGGGTGTTGCCAGGTGGATATTCCTCAGGGAATGAGGAATATCAGTATTACAGCATACAGCTTCAATGACCAAACAAAGTCAGTCTACAATAATTGTAGCTATGCTTTTGTGGCCAAACAAGGATGGTTTAATTTCTCTCGTTTTTATCTCTATCAATTTCCTTTTGACAAGGCCCCGCTGGTCGTAGATTGGGTTGTCTCAAATGATTCTTGTGACACTGCTTTGACATCATCCACCTATGCCTGCACCTCTAACTCCCGTTGTGTAAACTCTGTCTATGGATACGGATACCGTTGCAAATGCAAACCTGGTTTTGAAGGGAACCCATATCATCCAGATGGTTGCCATGACATAGATGAATGTACGGAATCAACCCATGACTGCATAAGTAAAGATCATTGTTTTAACACATTTGGGTCTTATGAATGTTATTGCCCACGCGGCTACTCTGGAAATGGAAAGAATAAGGAAGGAGGATGCCAGGCACCCTTGTGGCACAATCCACTTACTAAGGTTCTTGTTGGTGCAAGTGTAGGCTCGGTAGCTCTGTTTGTGAGTGTTTCCTGGTTGTTTTTGGTATACCAAAGGAGGAAGCTCATCAAATCAAAGGACAATTTCTTTCGGCAGAATGGCGGCTACATTTTGCAACAACAACTCTCTGGGAAACAAGCTTCCTCCCTCACTGCCAAAATCTTCACTGCTCAGGAATTGAAAAAGGCTACCAACAACTACCATGATAGCCTAATCATAGGCAGAGGAGGTTTTGGTACTGTTTATAAAGGATTTCTCCCAGACAACAGAATCGTTGCAATCAAGAAATCCAAACTGGTTGATCAAAGCCAAATTGAACAATTCATCAACGAGGTAATTGTGCTCTCCCAAATTAATCACAGAAATGTTGTCAAACTTCTAGGCTGTTGTTTAGAAACAGAGATTCCTCTGTTAGTTTATGAGTTCGTTAATAATGGTACCCTATTTGATTACATACACAACAAAACCAAAGCTTCTGATCATATCACTTGGGAAACCCGTTTAAGGATAGCTTCAGAAGTTGCAGGAGCACTATCATATCTTCATTCTGCTGCCTGCATACCCATAATCCATAGAGATGTCAAGACCTCCAACATTCTTCTAGATCAGACTTGCACTCCAAAAGTCTCTGACTTTGGAGCTTCCAGATTGGTCCCACTTGATCAAACTGAATTAGCCACAATGGTACAAGGCACTTTCGGATACTTGGACCCAGAATACATGCAAACCAACCAACTCACTGAGAAGAGTGATGTGTACAGTTTTGGAGTTGTACTAGTGGAGCTTCTCACAGGGAAGAAAGCCCTTAAATTTGATGGGcctgaagaagaaagaagtcTTGCCATGCACTTCCTTTCTTGCCTGACTCAGGGTCGCCTCTTTGAAGTTGTTGAAGTTGGCATAGTGAATGAGGAAAATAAGCTGAGGATCAACGAAGTGGCTGTGCTTGCAGCAAGGTGCCTGAGACTTAAAGGAGAGGAGAGACCTAGCATGAAGGAAGTGGCAATGGAGTTAGAGGGAAAAAGAATGATAGGAAAGCATCCATGGGTGAAGAAAGACCTTAATTTGGAAGAGTCTCAAATATTACTTCGTGACACGTTCAATTTTAGTGAGTGTGTTGATCATAGCATGGGTTTCAGAAACACTGGGTGGCATAGCATGTTAGATCATGTGCTAATTGACTTTGATGATGGAAGATGA 2244 0.4256 MHIESLLLCLILLAITEVVVNQSLPGCPNKCGDVEIPYPFGVGHQSGTGNKCFLEEETFSLSCDENSKLWHRNVEISSISVRGHMDMSMNVSRVCYDGSGRVLTENAAYLTTPAFTISSKENKFTSVGCDTYGYILGSQSSGSAYGSYATGCLTKCNTIPNEENGESCSGVGCCQVDIPQGMRNISITAYSFNDQTKSVYNNCSYAFVAKQGWFNFSRFYLYQFPFDKAPLVVDWVVSNDSCDTALTSSTYACTSNSRCVNSVYGYGYRCKCKPGFEGNPYHPDGCHDIDECTESTHDCISKDHCFNTFGSYECYCPRGYSGNGKNKEGGCQAPLWHNPLTKVLVGASVGSVALFVSVSWLFLVYQRRKLIKSKDNFFRQNGGYILQQQLSGKQASSLTAKIFTAQELKKATNNYHDSLIIGRGGFGTVYKGFLPDNRIVAIKKSKLVDQSQIEQFINEVIVLSQINHRNVVKLLGCCLETEIPLLVYEFVNNGTLFDYIHNKTKASDHITWETRLRIASEVAGALSYLHSAACIPIIHRDVKTSNILLDQTCTPKVSDFGASRLVPLDQTELATMVQGTFGYLDPEYMQTNQLTEKSDVYSFGVVLVELLTGKKALKFDGPEEERSLAMHFLSCLTQGRLFEVVEVGIVNEENKLRINEVAVLAARCLRLKGEERPSMKEVAMELEGKRMIGKHPWVKKDLNLEESQILLRDTFNFSECVDHSMGFRNTGWHSMLDHVLIDFDDGR 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2841 747 SMART egfca_6 238 287 IPR001881 GO:0005509
Sto9g2841 747 SMART egfca_6 288 332 IPR001881 GO:0005509
Sto9g2841 747 SMART egf_5 291 332 IPR000742 -
Sto9g2841 747 SMART egf_5 241 287 IPR000742 -
Sto9g2841 747 Pfam Protein kinase domain 415 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2841 747 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 20 717 - -
Sto9g2841 747 CDD STKc_IRAK 421 688 - -
Sto9g2841 747 ProSiteProfiles EGF-like domain profile. 288 323 IPR000742 -
Sto9g2841 747 Pfam Calcium-binding EGF domain 288 326 IPR001881 GO:0005509
Sto9g2841 747 ProSiteProfiles EGF-like domain profile. 238 287 IPR000742 -
Sto9g2841 747 SUPERFAMILY EGF/Laminin 288 323 - -
Sto9g2841 747 ProSitePatterns Calcium-binding EGF-like domain signature. 288 314 IPR018097 GO:0005509
Sto9g2841 747 SMART serkin_6 415 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2841 747 ProSitePatterns Protein kinases ATP-binding region signature. 421 444 IPR017441 GO:0005524
Sto9g2841 747 Gene3D Laminin 239 290 - -
Sto9g2841 747 ProSitePatterns Serine/Threonine protein kinases active-site signature. 537 549 IPR008271 GO:0004672|GO:0006468
Sto9g2841 747 Pfam Wall-associated receptor kinase galacturonan-binding 27 84 IPR025287 GO:0030247
Sto9g2841 747 ProSiteProfiles Protein kinase domain profile. 415 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2841 747 CDD EGF_CA 248 278 - -
Sto9g2841 747 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 20 717 IPR045274 GO:0007166
Sto9g2841 747 CDD EGF_CA 288 322 - -
Sto9g2841 747 SUPERFAMILY Protein kinase-like (PK-like) 396 687 IPR011009 -
Sto9g2841 747 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 305 316 IPR000152 -
Sto9g2841 747 Gene3D Transferase(Phosphotransferase) domain 1 491 702 - -
Sto9g2841 747 Gene3D Laminin 291 329 - -
Sto9g2841 747 Gene3D Phosphorylase Kinase; domain 1 382 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2841 Sto-Chr9 29934149 29936613 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2841 1 697 Receptor kinase-like Gene Family AT1G21230 46.424 0.0 596
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Sto9g2841 Pkinase 1.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2841 - - gmx:100819535 872.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0344 5 2068363 2070970 Sto9g2841 9 29934149 29936613 CCT
Sto9g2841 9 29934149 29936613 Sto9g2841 9 29934149 29936613 ECH