Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2840 ATGAAGCTTATTAAACTGTGGCTCATTCTACTAACAACCGTAGCAGTAGGTGTTGCTGAAGCCCAATCCCTCCCAGGTTGCCCCGACAAGTGTGGAGACGTTGATATTCCTTATCCATTTGGTGTGGGTGTACAACCTGGTACCGATCAAAACTGCTTTTTGGAGGATTCCTTTAGTCTCACTTGTGACAACTCCGTCTTATTATCCCAAAACCTCCCAATTTCTGGCATATCTCTCCAAGGATCTTTAGAAATGTCCATGTCTGTGGCCCCAAATTGTTACAATGAATCAGGAGGTGAGATATCAAATGTCCCGTCCTCTCTGGGCATCTCTGCTTTCACCATTTCCAGCAGCGCCAACGAGTTCATAAGTGTGGGTTGTGACACTTACGGCTATTTATACAGTTTCCATAACAACACTATTTACTCTACTGGCTGCTTAACGCGATGTTCCTCAGGAGACTCAGGCTGCAAGAGCTACTGGGTTCAACTTCTTGAGATGCAGTTCCATTTGAAATTGCTCTGCTGTTTCCTGTTCTATTTGAGGAGGTTATTATATGATTCAAGAAGTTCATTAAAATGGGGATTGTATTCAGTTACCTcagtttctccttcctcttctgtCTCCTTGGCCATAAGACAGAAGTCGGCTGTCTCCTTTTGTGTGGATATTCCTCTTGGCATGAGGAATATCACTTCTCAAGCATATAGCTTCAACAACCATGCACAAGTGTGGGACTTTAATAACTGCAGTTATGCTTTTGTTGCCAAACGAGAATGGTTTAATTTCTCCCTTGACTTTCTCGACTATTTACCTTATAGCAACACCCCTCTTGTGGTAGACTGGACTATTCCAAACGGTACATGTGAATCTGCTGAAGCCAGATCAGACTATGCCTGCACCTCCAACACCCGTTGTGTTGACTCCAACGATGGATTTGGGTATAATTGCAGATGTCTCGACGGTTTTGAGGGAAACCCCTACCATCCCGACGGCTGTCATGATGTAGATGAATGTGTAGAATCCACCCATAATTGCACAAGTCAAGAAAATTGTCGAAACACGTTTGGAACTTTTGAATGTTTCTGTCCACTTGGTTACTCTGGGAATGGAACCTCTGCAGCAAGATGCCAGGCTCCCTTGTCTAAGAATTCACTCACAATGGTTCTCATTGGTGTAAGTGTAGGCGTTGTAGTTCTGTGCGTGGGTTTGTCCTGGATGTACTTGGTATATCAGAAGAGGAAGCTGATGAAGCTAAAGCAGAAATTTTTTCGGCTGAATGGTGGATACGTTTTGCAACAACATCTCTCGGTAAAAGAAACTTCCTCCCAAACTGCTAAAATTTTCACCGCAGAGGAGTTAAAGAAGGCTACCAACAATTACCATGACAGCTTAATCATTGGAAGAGGAGGTTTTGGTACTGTTTACAAAGGATGTCTCGCAGATAACACAATCGTGGCAATCAAGAAGTCCAAGCGCGTGGATCAAAGCCAGATTGAACAGTTCATTAACGAGGTGGTTGTACTCTCCCAAATCAATCATAGGAATGTGGTCAAACTCCTAGGCTGTTGTTTGGAAACAGAGGTTCCTCTTCTGGTTTATGAGTTCGTTAACAATGGTACCCTCTTCGATTATATTCATAAGGAAAACAAGCACTCCGATGTGTCTTTGGAGACACGTTTGAGGATAGCAACAGAAGCAGCAGGAGCATTAGCTTATCTACACTCAGCTGCCTCCATACCCATAATACATAGAGATGTGAAGACCTCAAACATTCTTCTAGATGAGACTTACACTGCTAAAGTCTCTGACTTTGGAGCTTCTAGATTGGTTCCACTTGATGAAACTGGTCAATTAGCCACAATGGTACAAGGAACTTTTGGATACTTGGACCCAGAATACATGCAGAAAAATCAACTCACAGAGAAGAGTGATGTGTATAGTTTTGGTGTGGTACTGGTGGAGATGCTAACAGGGAAGAAAGCAATTTCATTTGATAGGTCAGAAGAGGAAAGAAATCTTGCCATGCACTTCCTTTCTTACTTGAATCGAGGTCACTTGTTTGAAATAGTTGAAGTTGGGTTAGTGAATGAGGAGAATAAGCAGAGAATCCATGAAGTAGCTGTGCTTGCAGCAAGGTGTGTGAGACTTAGAGGAGAGGAGAGGCCTAGCATGAAGGAAGTGGCAATGGAGTTGGAGGGAATTAGAGCAAATGGGAAACATCCATGGTTGGACAGAAACCTTAATTTGGAGGAAACTCAAGCATTGATTCGTGATGGTGAGACATTGggtttaattgaaaatttggaTAGCATCAATGACAGAAACGTTGGGTGGGACAGCATTACAAATCATCATGTGCTAATTAATTTGGATGACGGAAGATGA 2388 0.4217 MKLIKLWLILLTTVAVGVAEAQSLPGCPDKCGDVDIPYPFGVGVQPGTDQNCFLEDSFSLTCDNSVLLSQNLPISGISLQGSLEMSMSVAPNCYNESGGEISNVPSSLGISAFTISSSANEFISVGCDTYGYLYSFHNNTIYSTGCLTRCSSGDSGCKSYWVQLLEMQFHLKLLCCFLFYLRRLLYDSRSSLKWGLYSVTSVSPSSSVSLAIRQKSAVSFCVDIPLGMRNITSQAYSFNNHAQVWDFNNCSYAFVAKREWFNFSLDFLDYLPYSNTPLVVDWTIPNGTCESAEARSDYACTSNTRCVDSNDGFGYNCRCLDGFEGNPYHPDGCHDVDECVESTHNCTSQENCRNTFGTFECFCPLGYSGNGTSAARCQAPLSKNSLTMVLIGVSVGVVVLCVGLSWMYLVYQKRKLMKLKQKFFRLNGGYVLQQHLSVKETSSQTAKIFTAEELKKATNNYHDSLIIGRGGFGTVYKGCLADNTIVAIKKSKRVDQSQIEQFINEVVVLSQINHRNVVKLLGCCLETEVPLLVYEFVNNGTLFDYIHKENKHSDVSLETRLRIATEAAGALAYLHSAASIPIIHRDVKTSNILLDETYTAKVSDFGASRLVPLDETGQLATMVQGTFGYLDPEYMQKNQLTEKSDVYSFGVVLVEMLTGKKAISFDRSEEERNLAMHFLSYLNRGHLFEIVEVGLVNEENKQRIHEVAVLAARCVRLRGEERPSMKEVAMELEGIRANGKHPWLDRNLNLEETQALIRDGETLGLIENLDSINDRNVGWDSITNHHVLINLDDGR 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2840 795 SUPERFAMILY Protein kinase-like (PK-like) 440 733 IPR011009 -
Sto9g2840 795 Gene3D Phosphorylase Kinase; domain 1 429 536 - -
Sto9g2840 795 Pfam Calcium-binding EGF domain 335 377 IPR001881 GO:0005509
Sto9g2840 795 SUPERFAMILY EGF/Laminin 335 370 - -
Sto9g2840 795 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 224 763 IPR045274 GO:0007166
Sto9g2840 795 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 11 157 IPR045274 GO:0007166
Sto9g2840 795 ProSitePatterns Serine/Threonine protein kinases active-site signature. 582 594 IPR008271 GO:0004672|GO:0006468
Sto9g2840 795 SMART egf_5 288 334 IPR000742 -
Sto9g2840 795 SMART egf_5 338 378 IPR000742 -
Sto9g2840 795 Gene3D Transferase(Phosphotransferase) domain 1 537 752 - -
Sto9g2840 795 Gene3D Laminin 287 338 - -
Sto9g2840 795 Gene3D Laminin 339 379 - -
Sto9g2840 795 SMART serkin_6 461 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2840 795 SMART egfca_6 335 378 IPR001881 GO:0005509
Sto9g2840 795 ProSiteProfiles Protein kinase domain profile. 461 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2840 795 CDD STKc_IRAK 467 735 - -
Sto9g2840 795 CDD EGF_CA 335 369 - -
Sto9g2840 795 ProSitePatterns Calcium-binding EGF-like domain signature. 335 361 IPR018097 GO:0005509
Sto9g2840 795 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 352 363 IPR000152 -
Sto9g2840 795 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 11 157 - -
Sto9g2840 795 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 224 763 - -
Sto9g2840 795 Pfam Wall-associated receptor kinase galacturonan-binding 27 81 IPR025287 GO:0030247
Sto9g2840 795 ProSiteProfiles EGF-like domain profile. 335 378 IPR000742 -
Sto9g2840 795 Pfam Protein kinase domain 461 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2840 795 ProSitePatterns Protein kinases ATP-binding region signature. 467 490 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2840 Sto-Chr9 29921224 29932099 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2840 1 795 Receptor kinase-like Gene Family AT1G21230 42.469 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Sto9g2840 Pkinase 5.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2840 - - gmx:100819535 787.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2840 9 29921224 29932099 Sto9g2840 9 29921224 29932099 ECH