Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2839 atgaattatCTCTTCCGTTTAAGGATTGCAGCAGAAACAGCTGAGGCTGTGTCATATTTGCACTCTGCTGCTTCTATTCCAATAATCCATCGGGACATTAAATCTGCCAACATACTATTATTAGACCATAATCACAGAGCAAAGGTGTCTGACTTCGGAGCTTCAAGACTAGTTCCTCTTGATGAAACTCAAGTTACCACAGTAGTGCAGGGGACTCTTGGATACTTAGATCCAGAATACCTCCAAACAGGTGAGTTGAATGAGAAGAGTGATGTTTATAGCTTTGGGGTTGTGCTTATTGAGCTACTCACTGGGAATAAAGCAGTGGAATTGAATAGGCCAGAATCGAGTGTTGGAGCAGAAGAAGAATATTGGAGAGCTTTATTGGGAAGGAGGTGTGTTAGAGTGAATGGAGAAGAAAGGCCAACTATGAAGGAGGTAGCAATGGAGCTAGAAGGTCTGATAATTGCAATGGAAAAGCATCCTTGGGTTAAGGGGAAGGATCCCATATCAGAAGAAAATGAATACTTATTACTTGGTCATGTACCTGATGGATATGAGGCCGCTAGTAGTACTACTGCTTCAGCTGCCTATGATACCATACAGAAGCAAATAGCATTTGAAATTGAAGATGGGCGTTGA 642 0.4159 MNYLFRLRIAAETAEAVSYLHSAASIPIIHRDIKSANILLLDHNHRAKVSDFGASRLVPLDETQVTTVVQGTLGYLDPEYLQTGELNEKSDVYSFGVVLIELLTGNKAVELNRPESSVGAEEEYWRALLGRRCVRVNGEERPTMKEVAMELEGLIIAMEKHPWVKGKDPISEENEYLLLGHVPDGYEAASSTTASAAYDTIQKQIAFEIEDGR 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2839 213 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 6 116 - -
Sto9g2839 213 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 126 194 - -
Sto9g2839 213 ProSitePatterns Serine/Threonine protein kinases active-site signature. 28 40 IPR008271 GO:0004672|GO:0006468
Sto9g2839 213 SMART serkin_6 1 164 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2839 213 SUPERFAMILY Protein kinase-like (PK-like) 2 169 IPR011009 -
Sto9g2839 213 Pfam Protein kinase domain 9 117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2839 213 Gene3D Transferase(Phosphotransferase) domain 1 1 176 - -
Sto9g2839 213 ProSiteProfiles Protein kinase domain profile. 1 164 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2839 213 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 6 116 IPR045274 GO:0007166
Sto9g2839 213 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 126 194 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2839 Sto-Chr9 29904456 29905165 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2839 6 213 Receptor kinase-like Gene Family AT1G21240 51.489 2.13e-67 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Sto9g2839 Pkinase 7.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2839 - - qlo:115959581 222.246