Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2838 ATGCCGATGTCGTCCCCTACTTCATCTTCGTCTCCATATTCCCTCAGATCCATTCACTCTCACTCAGGTAGTGATTCCAGCGTTGTGTTCAGTTTATTGGCCAGGGTCAAGAATGAATTTGACAAGACTTCCATTAATTCCGGATCACCCGCCTCTAATTTCGACGTTTCCTCCCTAATCGGACGAGACTCTAGGCTCCCTACATTTCTCAGCATAGACCTTCCATTTAGCTTCTCTTCTCTGCTCTCAAATGAATTGGCCTCTTCACACTGTTCTTTCACTAACTGCCGCAGCCTTTCTCTGTTTTCCGGCATCCAATCCGATTACGATCAAAGTTCTTCAAGTTCCGCTCTAAATGCCGAATGCCTGCACTCCCACGATGACATAGACGAACGTTCCCAATCATCTGGGGATGAAACCATGGCCGGAGGAGGTCAGCAACCCTTGCAAAGGAATCCATTTATAAAGATTCTCGATGCTCTCTTTGCGGGTGTGCCCTGGGTATACCAGAAGAGGAAACGCAACAAATTAAAGGAGAAATTCCTTCGGCATAATGGTGGCTCCATCTTGCGACAACAACTCTCAGTAAATGCTGCCTTTCAAACCCCGAAACTCTTCACTGCAGAAGAATTGGAAACGGCTACCAACAACTACCACGACAACTTAATCATTGGCAGAGGAGGTTTTGGTATTGTTTACAAAGGATTTCTCGCAGACAACACAGTCGTTGCAATCAAGAAATCAAAACTGGTGAACCACAGCCAAATCCAACAATTCATTGACAATGTCGTTTTACTCTCCCAAATTAATCATAGGAATGCGGTGAAGGTCCTAGGCTGTTGTTTGGAAACACAAGTTCCCTTGTTGGTTTATGAGTTCGTTAACAATGGTACCCTCTTCGATTACATAAATAGCAAAAGTAAGACCTCCAATGACGTATCTTTGGAAACCCGTTTGAAGATAGCAGCAGAAGCAGCAGCAGCATTATCATATCTGCATTCTGCTGCATCCATACCCATGATCCATGGAGACGTCAAGACTTTAAACATTCTTTTAGATGAGAGTTACACAGCCAAAGTGACTGATTTTGCAGTTTATGGATTGGTTCCATTTCCACTCGATGAATATTTGGAATTGGACACAACAATGGTACAAGGCACTTTTGCATACCTGGATCCAGAATACTTGTACACAAACCAACTCACTGAGAAGAGCgatgtttatagttttggggttGTGCTTGTAGAACTGCTCACGGGCAAGAAACCACTTTCATTTGATAGGTCCAAAGAGGAAAGAACTCTTGCTTTGCACTTCCTTTCGTCCTTGAAGAAGGGTGAATTGTTAAAAGTAGTTGAAGTGGGGAtagtgaataataaaaatatggagaTGGTGCAGGAAGTGGCTAATCTGGCAGCAAGGTGCTTAAGAGTTAGAGGAAAAGAGAGACCAAACATGGAGGAAGTGGCAATGGAGATAGAGGGAATAAGGATGATAGGGAAGCATTTAATGGTTGACAAAGACGTTATCAATTTGGAGGAAACTCAATCATTAATTATGGAGACATCGGATTTAAGTGAATGTGGGGAAAGCATAAATTTGGAGGAAACTCAATCATTAATTATGGAGACATCGGATTTAAGTGAATGTGGGGAAAGCATAAATTTGGAGGAAACTCAATCGTTGATTGTGGAGACATCGGATTTAAGTGGAAGTTGGGGAAGCATAAACTTGGATGAAACTCAATCATTGACTGTGGAGACATCGGATTTTAGTGAATGGGGGGAAAGCATAAGCAGTCAAAACAGTGGATGGGATAATAGCATTAGAGATCATGGAGAAGAGGTAGCTTCTTGGACAATACAGCATCTCTTTCCAGTATTCCTTAGTAGAATCAATACAAGGAAGTCCTTCTTCGAGTCAAGGACAAACTCCGAGTCTAACGACTTCAGCAAATACAAGCATGATCAAAAGCCTCCATATCATGAACAACTCTTGCATATCTTCTATAgGAGAGGCCGAGGAAAATGCATGGTGGTCTTGGTCAACATAAGTGTCGGGCGCAACCTTGCATTTGCACATATTGATTTGGATGTAAAGGCAGAATTGGAAAACATTATAGTAATGAGTTTGAATGTTGCAATGAAGTTGAAACTAGCATTGCTGGCTTGCGCAGTGACAGCAGCAGCAGGTGAATTTGAATTATCGAAGGCAGGTTGCGAGAGCTCGTGTGGGAATGTGAGCATCCCCTATCCCTTTGGCACCCGTGAAGGCTGCTTCAGAGATGACAATTTTCTCATATCCTGCAACTCTTCCTCCGGAAAGCCCATGGCTAATTACAGCGACTCCAATATTCAAGTTCTCCACATCTCCCTCAATGGTGAAATGCGCATCTCAACTTGGGTTTCCTATCTTTGCAATGAAGACGATGACTCCACCACATACTTCTCCATTAATCCTATGTTAACCATTTCTAATGTCAAGAACAAATTCACCGTCATCGGCTGCAACACCATTGGTTCCATCACCGACATAGAGGAAAACAGGTTCCAAACTGGCTGCTTGTCCATCTGCAAAAACATGGCATACGTCACAAATGGATCCTGCTCTGGTATTGGTTGCTGCCATACCACTTTCCCCACAGCCATTGGAGATTATTCCATTAGTATCAAGTATTATAACAAGACACTCGTCCACAACTCCACTCCTTGTAGCTATGCATTTGTTGTGGAGCATGATCActacagtttttcctctttaGACCTCCACAATCACCAGCACAAAACAGATTCTCCTGTCCTCCTCAATTGGGTTGTTGACAGTAAGACATGCGCTGAAGCCAAAACAAACAAAACCACCTATGCCTGCAAGGACAACACCATATGCGAGGACAGTTTACAAGTAAGTGATCGTATTGGCTACCTCTGCAAATGTAAACCAGGGTTCCAAGGCAACCCTTACCTCTCTCACCCCCTTGGCTGCAAAGATATTGATGAGTGCAGCATAAAGAATAATTGCAGTAAGACATGCCAAAATATATATGGTAACTATACCTGTTCTTGTCCGTGGGGATACAGAGGTGATGGCTACATTCATGGATCAGGCTGCTCATTGCCTATCATTGAAATATCATTAGGCATTAGTGTAGCCTTGCTTTTTGTGATTACGCTGGTCTTCTTGTTATGTTGGGTACACAAGCGAAGAACCTTGAAACAACTTAGGAGAAGAAATTTTGAGCAGAATGGAGGAACCATGTTGCAAGGATATGGTGACAGAACCAAGATATTTACTGAAGTTGAGCTTAAGACTGCCACAGACAACTTTGACGAAAACAAAATACTTGGTCGTGGAGGACAAGGGACAGTTTACAAGGGTATACTACCAGATAACACGCCAGTAGCCATTAAGAAGTCCATAGTAGGAGGGGATCCTAGACAAATCAAGGATTTCATCAATGAACTGGCTGTGCTCTCTCAAATTAACCATAGGAATGTGGTCAAACTTTTGGGATGTTGTCTGGAAACCCAAGCTCCTTTGTTAGTTTACGAGTTTGTGGACAACGGTACCCTTCTTGACCACATAGACCCATTAAAGAGCAAGTGCCCTATATCGTGGGAGACCCGTTTAAGGATTGCTGCAGAAACTTCTGAGGCCATTTCATATTTGCATTCTGCTGCTTCTATCCCAATAATTCATCGAGATATTAAATCTACCAATATACTATTAGATCATAATCATAGAGCAAAGGTGTCTGATTTTGGAGCTTCAAAACTAGTTCCTCTTGATGAAACTCAGATTACAACAGTGGTGCAGGGGACTCTTGGATACTTGGATCCAGAGTACCTACAGACAGGTCAGTTGAATGAGAAAAGTGATGTTTATAGCTTTGGAGTGGTGCTAGTGGAGCTACTCACTGGGAATAAAGCAGTTGAATTCAATAGGCCAGAACAGAAAAATTTGGCTATGTACTTTGTATCTTCTATGAAAGAAGACAATTTGTGGGAGATTCTAGACAGACAAATGCTGGAGCAAAAGAAGAATGCAGAGCAGGTAAAGAAAGTAGCTTTATTGGCAAGGAAGTGTCTGAGAGTGGTTGGAGAGGAAAGACCCACTATGAAGGAAGTAgcgatggagctagatggtctGATTGCAATGGAAAATCATCCTTCGGTGAAGGGTGAGGATCCGAAATCTGAAGAAAATGAAAACACACTTGATCATGTAGATGTGGTTGACGAATATAGGAATGCCAGTGCTAGTAATTCAGCTGCCTATGATAGCATACAGAAGCAGATATCATTTGAAGATGTAGATGGGCGATGA 4323 0.4178 MPMSSPTSSSSPYSLRSIHSHSGSDSSVVFSLLARVKNEFDKTSINSGSPASNFDVSSLIGRDSRLPTFLSIDLPFSFSSLLSNELASSHCSFTNCRSLSLFSGIQSDYDQSSSSSALNAECLHSHDDIDERSQSSGDETMAGGGQQPLQRNPFIKILDALFAGVPWVYQKRKRNKLKEKFLRHNGGSILRQQLSVNAAFQTPKLFTAEELETATNNYHDNLIIGRGGFGIVYKGFLADNTVVAIKKSKLVNHSQIQQFIDNVVLLSQINHRNAVKVLGCCLETQVPLLVYEFVNNGTLFDYINSKSKTSNDVSLETRLKIAAEAAAALSYLHSAASIPMIHGDVKTLNILLDESYTAKVTDFAVYGLVPFPLDEYLELDTTMVQGTFAYLDPEYLYTNQLTEKSDVYSFGVVLVELLTGKKPLSFDRSKEERTLALHFLSSLKKGELLKVVEVGIVNNKNMEMVQEVANLAARCLRVRGKERPNMEEVAMEIEGIRMIGKHLMVDKDVINLEETQSLIMETSDLSECGESINLEETQSLIMETSDLSECGESINLEETQSLIVETSDLSGSWGSINLDETQSLTVETSDFSEWGESISSQNSGWDNSIRDHGEEVASWTIQHLFPVFLSRINTRKSFFESRTNSESNDFSKYKHDQKPPYHEQLLHIFYRRGRGKCMVVLVNISVGRNLAFAHIDLDVKAELENIIVMSLNVAMKLKLALLACAVTAAAGEFELSKAGCESSCGNVSIPYPFGTREGCFRDDNFLISCNSSSGKPMANYSDSNIQVLHISLNGEMRISTWVSYLCNEDDDSTTYFSINPMLTISNVKNKFTVIGCNTIGSITDIEENRFQTGCLSICKNMAYVTNGSCSGIGCCHTTFPTAIGDYSISIKYYNKTLVHNSTPCSYAFVVEHDHYSFSSLDLHNHQHKTDSPVLLNWVVDSKTCAEAKTNKTTYACKDNTICEDSLQVSDRIGYLCKCKPGFQGNPYLSHPLGCKDIDECSIKNNCSKTCQNIYGNYTCSCPWGYRGDGYIHGSGCSLPIIEISLGISVALLFVITLVFLLCWVHKRRTLKQLRRRNFEQNGGTMLQGYGDRTKIFTEVELKTATDNFDENKILGRGGQGTVYKGILPDNTPVAIKKSIVGGDPRQIKDFINELAVLSQINHRNVVKLLGCCLETQAPLLVYEFVDNGTLLDHIDPLKSKCPISWETRLRIAAETSEAISYLHSAASIPIIHRDIKSTNILLDHNHRAKVSDFGASKLVPLDETQITTVVQGTLGYLDPEYLQTGQLNEKSDVYSFGVVLVELLTGNKAVEFNRPEQKNLAMYFVSSMKEDNLWEILDRQMLEQKKNAEQVKKVALLARKCLRVVGEERPTMKEVAMELDGLIAMENHPSVKGEDPKSEENENTLDHVDVVDEYRNASASNSAAYDSIQKQISFEDVDGR 1440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2838 1440 ProSiteProfiles Protein kinase domain profile. 1108 1391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2838 1440 CDD EGF_CA 996 1028 - -
Sto9g2838 1440 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 165 530 - -
Sto9g2838 1440 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 724 1413 - -
Sto9g2838 1440 Pfam Calcium-binding EGF domain 996 1026 IPR001881 GO:0005509
Sto9g2838 1440 MobiDBLite consensus disorder prediction 129 148 - -
Sto9g2838 1440 Gene3D Transferase(Phosphotransferase) domain 1 294 511 - -
Sto9g2838 1440 Gene3D Transferase(Phosphotransferase) domain 1 1185 1405 - -
Sto9g2838 1440 SMART serkin_6 218 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2838 1440 SMART serkin_6 1108 1383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2838 1440 Pfam Protein tyrosine and serine/threonine kinase 223 491 IPR001245 GO:0004672|GO:0006468
Sto9g2838 1440 MobiDBLite consensus disorder prediction 1 23 - -
Sto9g2838 1440 SUPERFAMILY EGF/Laminin 996 1029 - -
Sto9g2838 1440 ProSitePatterns Calcium-binding EGF-like domain signature. 996 1019 IPR018097 GO:0005509
Sto9g2838 1440 Pfam Wall-associated receptor kinase galacturonan-binding 740 798 IPR025287 GO:0030247
Sto9g2838 1440 Gene3D Phosphorylase Kinase; domain 1 1084 1184 - -
Sto9g2838 1440 Gene3D Phosphorylase Kinase; domain 1 190 293 - -
Sto9g2838 1440 SMART egfca_6 996 1037 IPR001881 GO:0005509
Sto9g2838 1440 SUPERFAMILY Protein kinase-like (PK-like) 199 491 IPR011009 -
Sto9g2838 1440 ProSiteProfiles EGF-like domain profile. 996 1028 IPR000742 -
Sto9g2838 1440 SUPERFAMILY Protein kinase-like (PK-like) 1094 1390 IPR011009 -
Sto9g2838 1440 CDD STKc_IRAK 1114 1382 - -
Sto9g2838 1440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 340 352 IPR008271 GO:0004672|GO:0006468
Sto9g2838 1440 Gene3D Laminin 943 1030 - -
Sto9g2838 1440 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 165 530 IPR045274 GO:0007166
Sto9g2838 1440 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 724 1413 IPR045274 GO:0007166
Sto9g2838 1440 Pfam Protein kinase domain 1109 1375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2838 1440 ProSiteProfiles Protein kinase domain profile. 218 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2838 1440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1230 1242 IPR008271 GO:0004672|GO:0006468
Sto9g2838 1440 ProSitePatterns Protein kinases ATP-binding region signature. 224 247 IPR017441 GO:0005524
Sto9g2838 1440 SMART egf_5 999 1037 IPR000742 -
Sto9g2838 1440 SMART egf_5 943 995 IPR000742 -
Sto9g2838 1440 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 1010 1021 IPR000152 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2838 Sto-Chr9 29896264 29903696 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2838 165 507 Receptor kinase-like Gene Family AT1G21230 49.713 1.47e-101 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Sto9g2838 Pkinase 9.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2838 - - csin:114268081 741.495