Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2837 CTGATTCTGTTGGCAATCACGGAAGTAGTAGTAAATCAATCTCTGCCTGGCTGCCCCAACAAATGTGGAGACGTTGAGATTCCCTATCCATTTGGTGTGGGTCACCAATCTGGTACTGGAAACAAGTGCTTCTTAGAGGAAGAGACTTTTAGTCTGTCTTGTGATGAAAACTCCAAATTATGGCATCGAAACGTCGAAATCTCAAGCATATCTGTCAGAGGTCATATGGACATGTCCATGAATGTGTCTCGTGTATGCTACGATGGATCAGGGAGAGTATTAACCGAAAATGCAGCATATCTGACAACCCCTGCATTCACCATTTCTAGCAAGGAGAACAAGTTCACGAGTGTTGGGTGCGACACCTACGGCTATATCCTAGGTTCCCAGAGCAGTGGGAGTGCATATGGGTCTTATGCCACCGGTTGCTTAACCAAATGTAACACAATTCCCAACGAAGAGAACGCAAAGCTGAATAGTAATTCTTGTTCTGGGATTGGGTGTTGCACAGTGGATATTCCTCTTGGCATGAGGAATATCACTTCTCAAGCATATAGCTTCAACAACCATGCACAAGTGTGGGACTTTAATAACTGCAGTTATGCTTTTGTTGCCAAACGAGAATGGTTTAATTTCTCCCTTGACTTTCTCGACTATTTACCTTATAGCAACACCCCTCTTGTGGTAGACTGGACTATTCCAAACGGTACATGTGAATCTGCTGAAGCCAGATCAGACTATGCCTGCACCTCCAACACCCGTTGTGTTGACTCCAACGATGGATTTGGGTATAATTGCAGATGTCTCGACGGTTTTGAGGGAAACCCCTACCATCCCGACGGCTGTCATGATATTGATGAGTGCAGCATAAAGAATAATTGCAGTAAGACATGCCAAAATATATATGGCATTAGTGTAGCCTTGCTTTTTGTGATTACGCTGGTCTTCTTGTTATGTTGGGTACACAAGCGAAGAACCTTGAAACAACTTAGGAGAAGAAATTTTGAGCAGAATGGAGGAACCATGTTGCAAGGATATGGAAGCATGTTGGAAGGGTATGGAGACAGAACCAAGATATTTGCTGAAGTTGAGCTTAAGACAGCCACAAAGAACTTTGATGAAAGCAGAATACTAGGTCGTGGAGGACAAGGGACAGTTTACAAGGGTATATTACCGGATAACACACTAGTAGCCATTAAGAAGTCCAGAGCAGGAGCGGATCCTAGACAAATCAAGGATTTCATCAACGAAGTGGCTGTACTTTCCCAAATCAACCATAGGAATGTGGTCAAACTCTTGGGATGTTGCCTAGAAACCGATGCTCCTTTGTTAGTTTATGAGTTTGTAGACAATGGAACCCTTCTTGACCACATAGACCCATTAAAGAGCAAGTCCCCTATTCCATGGGACACCCGTTTAAGGATTGCTGCAGAGACTGCTGAGGCCATTTCATATTTGCATTCTGCTGCTTCTATCCCAATAATTCATCGAGATATTAAATCTACCAACATACTATTAGATCATAATCACAGAGCAAAGGTGTCTGATTTTGGAGCTTCAAGACTTGTTCCTCTTGATGAAACTCAGGTCACCACAGTGGTGCAGGGGACTCTTGGATACTTGGATCCAGAGTACCTACACACGGGTCAGTTGAATGAGAAAAGTGATGTTTATAGCTTTGGAGTGGTGCTTGTGGAGCTGCTCACTGGGAATAAAGCAGTTGAATTCAATAGGCCAGAACAGAAAAATTTGGCTATGTACTTTGTGTCTTCTATGAAAGAAGACCGTTTGTGGGAAATTCTAGATAGTCAAGTGCTGGAGCAGGAGAAGAATGCAGAGCAGCTGAAGGGAGTAGCTTTATTGGCAAGGAAGTGTCTCAGAGTGAATGGAGAAGAAAGGCCAACTATGAAGGAAGTAGCAATTGAGCTAGACGGTCTGATTGCAATGGAAAAGCATCCTTCGGTGAAGGGTGAGGATTCGATGttggatgaaaatgaaaatgaaaacaaaagcaTACTTGGTAATGTTAATGTGCTTGATGGATACGATGATGCTAGTGCTAGTAATTCTGCTGGCTATGATAGCATACAGAAGCAGATACCATTTGAGATTGCAGATGGGCGATGA 2127 0.4274 LILLAITEVVVNQSLPGCPNKCGDVEIPYPFGVGHQSGTGNKCFLEEETFSLSCDENSKLWHRNVEISSISVRGHMDMSMNVSRVCYDGSGRVLTENAAYLTTPAFTISSKENKFTSVGCDTYGYILGSQSSGSAYGSYATGCLTKCNTIPNEENAKLNSNSCSGIGCCTVDIPLGMRNITSQAYSFNNHAQVWDFNNCSYAFVAKREWFNFSLDFLDYLPYSNTPLVVDWTIPNGTCESAEARSDYACTSNTRCVDSNDGFGYNCRCLDGFEGNPYHPDGCHDIDECSIKNNCSKTCQNIYGISVALLFVITLVFLLCWVHKRRTLKQLRRRNFEQNGGTMLQGYGSMLEGYGDRTKIFAEVELKTATKNFDESRILGRGGQGTVYKGILPDNTLVAIKKSRAGADPRQIKDFINEVAVLSQINHRNVVKLLGCCLETDAPLLVYEFVDNGTLLDHIDPLKSKSPIPWDTRLRIAAETAEAISYLHSAASIPIIHRDIKSTNILLDHNHRAKVSDFGASRLVPLDETQVTTVVQGTLGYLDPEYLHTGQLNEKSDVYSFGVVLVELLTGNKAVEFNRPEQKNLAMYFVSSMKEDRLWEILDSQVLEQEKNAEQLKGVALLARKCLRVNGEERPTMKEVAIELDGLIAMEKHPSVKGEDSMLDENENENKSILGNVNVLDGYDDASASNSAGYDSIQKQIPFEIADGR 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2837 708 Gene3D Plasmodium vivax P25 domain 228 305 - -
Sto9g2837 708 SUPERFAMILY Protein kinase-like (PK-like) 357 640 IPR011009 -
Sto9g2837 708 CDD STKc_IRAK 378 646 - -
Sto9g2837 708 SMART serkin_6 372 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2837 708 Pfam Protein kinase domain 373 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2837 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 494 506 IPR008271 GO:0004672|GO:0006468
Sto9g2837 708 Gene3D Phosphorylase Kinase; domain 1 350 448 - -
Sto9g2837 708 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 302 681 IPR045274 GO:0007166
Sto9g2837 708 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 12 303 IPR045274 GO:0007166
Sto9g2837 708 ProSiteProfiles Protein kinase domain profile. 372 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2837 708 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 302 681 - -
Sto9g2837 708 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 12 303 - -
Sto9g2837 708 Pfam Wall-associated receptor kinase galacturonan-binding 18 75 IPR025287 GO:0030247
Sto9g2837 708 Gene3D Transferase(Phosphotransferase) domain 1 449 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2837 Sto-Chr9 29891136 29936586 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2837 1 708 Receptor kinase-like Gene Family AT1G21230 44.882 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Sto9g2837 Pkinase 1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2837 - - jre:109017900 633.639