Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2819 ATGTCATTAGTTAGATCTGCAGAGCTGGCTGCTACATCATGTAGAAATGCAAAACTCTACTCACTAAAGGGAACTGATGTGAAGTCTGGCTTGTCCTCCCAAATTTTTGGTCCTGATAAGCACAGAAGCATGTACACCACAGATTCTTACTCCAGTGAGAGTTATGAGAAGTACTTCCATGATTCACCAACTGAAGAACTGACAGAACCATCTAGTTCCGGCATCTCCAGCAGTTCATTTCGCCTGGACTATGCTTCTTCTTACCAGCCCAGAGCTAGTTCAGGAGCTGCTTTGGTTGCAAATAACCCATTTGATACTTCTTTCGTGTCCACGAGGCGTCATGATGCCTATCATCAATCCGACTTTGGATCAGATTTTTTGGAAAATGAGAGCCCGGATGCGCTTGACTTCAACAATGGTCAAATGAGATTGAAACTACAAGAATTAGAGAGGGCCTTGCttgatgataatgatgaggAGGATGAGGAGGAAGACATGTTTGGGACTGCTCAAAGCATGGAAATTGACCCTGAGTGGGCTGATCCCATTCAGAATATGCTGCTCCATGACTCACCAAAGGAGTCTTCATCCTCGAGCTCTTATCTTAGCAGCATCAGTAGCAACAAAGAGATATCTCAAAGTTCTCCTAGGACCCCCAGGCAAATGCTTCTTGAATGTGCCAATGTGCTTTCAGAAGGAAATGTAGAGGAAGCAACTGCGATGGTAAATAATCTCCGGCAAATGGTCTCGATTCAGGGAGATCCCCCCCAAAGAATTGCAGCCTACATGGTGGAAGGACTTGCAGCTCGCATGGCTGAGTCTGGAAAATGCCTTTATAAAGCTCTGAAATGCAAGGAACCTCCTTCTTCAGATCGTCTAGCAGCTATGCAGATACTGTTTGAAGTGTGTCCATGTTTCAAATTTGGATTCATTGCTGCAAATGGTGCAATCACAGAGGCAGTTAAAGATGACAAGAAGATTCATATAGTAGATTTTGACATCAATCAAGGAAGCCAATACATAACTCTGATACAATCACTTGCTTCAAGGCCTGGAAAACCACCCCATGTGAGGCTGACCGGTGTTGATGATCCCGAATCTGTGCAGCGATCAGTTGGAGGCCTTGAGATCATAGGGCAAAGACTTGAAAAGCTGGCCGAAGCACTCGGGTTGCCATTCGAGTTTCAAGCCGTGGCATCAAGGACATCACTTGTCACCCCTTCAAAGCTGGACTGTCGCCCTGGGGAAGCACTAGTGGTGAACTTTGCATTCCAGCTTCATCACATGCCTGATGAGAGTGTTTCAACAGTAAATGAAAGAGACCAACTTCTGCGCATGGTTAagagcctaaatcccaaactagTGACAGTTGTGGAACAAGATGTGAACACAAACACCACCCCTTTTTTCCCAAGATTTGTTGAATCCTACAATTATTACTATGCTGTTTTCGAGTCTCTAGATGTGACTCTTCCTAGGGAGAGTCAGGACAGGATGAATGTTGAGAGGCAATGCTTAGCAAGGGACATTGTCAACATTGTTGCTTGTGATGGTGAGGATCGGATTGAACGGTATGAAGTTGCAGGGAAATGGAGAGCAAGAATGGCTATGGCTGGCTTCACTGCATCCCCAATGAGTGCTCATGTCACTGATTCAATTCGCAAACTGATTAAGCAGTACTGTGACAGGTACAAGATGAAGGAGGAAATGGGTGCACTTCATTTTGGGTGGGAAGACAAGAACTTGATTGTTGCTTCAGCATGGAGTTACTGCTTACCATGA 1782 0.4416 MSLVRSAELAATSCRNAKLYSLKGTDVKSGLSSQIFGPDKHRSMYTTDSYSSESYEKYFHDSPTEELTEPSSSGISSSSFRLDYASSYQPRASSGAALVANNPFDTSFVSTRRHDAYHQSDFGSDFLENESPDALDFNNGQMRLKLQELERALLDDNDEEDEEEDMFGTAQSMEIDPEWADPIQNMLLHDSPKESSSSSSYLSSISSNKEISQSSPRTPRQMLLECANVLSEGNVEEATAMVNNLRQMVSIQGDPPQRIAAYMVEGLAARMAESGKCLYKALKCKEPPSSDRLAAMQILFEVCPCFKFGFIAANGAITEAVKDDKKIHIVDFDINQGSQYITLIQSLASRPGKPPHVRLTGVDDPESVQRSVGGLEIIGQRLEKLAEALGLPFEFQAVASRTSLVTPSKLDCRPGEALVVNFAFQLHHMPDESVSTVNERDQLLRMVKSLNPKLVTVVEQDVNTNTTPFFPRFVESYNYYYAVFESLDVTLPRESQDRMNVERQCLARDIVNIVACDGEDRIERYEVAGKWRARMAMAGFTASPMSAHVTDSIRKLIKQYCDRYKMKEEMGALHFGWEDKNLIVASAWSYCLP 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2819 593 Pfam GRAS domain family 220 588 IPR005202 -
Sto9g2819 593 Coils Coil 146 166 - -
Sto9g2819 593 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 10 589 IPR005202 -
Sto9g2819 593 MobiDBLite consensus disorder prediction 188 219 - -
Sto9g2819 593 ProSiteProfiles GRAS family profile. 210 589 IPR005202 -
Sto9g2819 593 MobiDBLite consensus disorder prediction 189 219 - -
Sto9g2819 593 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 10 589 IPR030011 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2819 Sto-Chr9 29758529 29760474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2819 1 588 GRAS Transcription Factor Family AT1G21450 63.697 0.0 736
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sto9g2819 GRAS 5.7e-136 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2819 - - gmx:100788103 885.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0330 5 1968319 1970471 Sto9g2819 9 29758529 29760474 CCT
Sto9g2819 9 29758529 29760474 Sto9g2819 9 29758529 29760474 ECH