Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2818 ATGACCCGTAAAAGTGAAGCCGTGCGTGGCGACGAAGATGATTCTGCTATTGATAAGAAATGCAACACCTTCTTCGATGTCTACGGACCTCAAGGCAAGGCAGatattgtttttaaaacaccAGAAGCTAATTCAACTTTGAATCTTCAAGATGTTCAAGGACTTGTAACTTGGGTTCTTGCTGAAGGATTTATGCCATCATGGGTTTTTATTAAGAACAAACCGCTTATTCCAAAAGTGGTTATGCTCTATATACCAGGCCTCGATGCAGCTTTGTACTTGTCACAATCTAAAATGCTCCcatgtttaaaaaaattctgtGGCAATCCAAGGGCAGTCTTAGCTCTTAGctGTGTATCAGATGGAATGCAGACAATAGATGCACTCCTAACAAGCAAGATGAAAAGAAAGAGGGATGAAAGTAGTTCCGTTATGAAGAAATCTACCTTGATATCTCAGCAAGAAAAAAGTGGTGACACTACAGATACGCTGTCATTTACAGAGCTTACAAAAGACATACCTTTCCCTGTTTCATATTATACACTTACTAAGAAAGAACTAGAAGACAACGGATATTCATTTGGTAAAGATTTTCTTTCTACTTTGCCCGCTCCTCAGGGATCTTCCCCTTATGAAATGCTGGCTCTTGATTGTGAGATGTGCATAACAAGGGAGGGTTTTGAACTTACAAGAATTACCCTAGTGGATGTCAAGGGACAGGTTTTGCTAGATAAATTGGTTAAACCATCAAATGCAATTACTGATTACAATACCAGGTTTAGTGGTATAACTCCTGACATGTTAAATGGGGTGACCACAAATCTGAAAGACATTCAGGAAGAGTTTCTAAAGCTGGTTTACAAAGAGACTATCCTAGTTGGGCATTCTTTGGAGAATGACTTGTTAGCACTGAAGATCTCTCATGGTTTGGTCATTGACACAGCTGTATTATACAAACACCCCCGAGGTTCATCTCATAAAACTGCTCTACGGATTCTTGCTAAGAAATTTCTTTCTCGGGAAATACAGCAATCAGGGAATGGACATGACAGCACTGAAGATGCTAGAGCTACAATGGAATTGGCACTTTTGAAGATCAGACATGGACCTGACTTTGGTTCTCCCCCATCATTCATGCGGAAAAAGCTCTCTTCCATTTTGAGCGAGTCAGGGAAAACTTCCTCTTTGATTGATGATTTATCCATAGTAAAGCGCTATGCCAGCGAATCCTCCCATGCAATTCCTGTGACTTCTGATGATGAAGCACTTGCAAGGACCACTAAGGAGGTGAAGAATGATAAGGTACATTTTGTCTGGACACAGTTTTCAGAATTACATTCATACTTGAAGAAGCAAGCTGGGGATTCAGAGATCTTGAATAGAAGACTTGCAGAGATGATGTCATTACTTACTTGTCAAAAGAATTCTTCCAAAGGAAAAGAGATCAAGCTGAGAGCAACTGCTGAATTGAAGGAAATTCTATCTCGCATGGATGCTAGAATTCAGACTCTGTATAGTTCATTACCCTCTAATGCTATGTTGATAATTTGCACCGGTCATGGAGACACAGCAATTGTGCAAAGACTGAGGAGAATGCTTACTGGGCCCAATGAAGCTAATATATGTCGTGAGAAGATTGTGGAAATCCTAGAAGAGGTTCAGGCCCGAGCTGAGGTAGCATTGTGTTTTGTAGGTGTAAAGCATTGA 1707 0.3978 MTRKSEAVRGDEDDSAIDKKCNTFFDVYGPQGKADIVFKTPEANSTLNLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMLYIPGLDAALYLSQSKMLPCLKKFCGNPRAVLALSCVSDGMQTIDALLTSKMKRKRDESSSVMKKSTLISQQEKSGDTTDTLSFTELTKDIPFPVSYYTLTKKELEDNGYSFGKDFLSTLPAPQGSSPYEMLALDCEMCITREGFELTRITLVDVKGQVLLDKLVKPSNAITDYNTRFSGITPDMLNGVTTNLKDIQEEFLKLVYKETILVGHSLENDLLALKISHGLVIDTAVLYKHPRGSSHKTALRILAKKFLSREIQQSGNGHDSTEDARATMELALLKIRHGPDFGSPPSFMRKKLSSILSESGKTSSLIDDLSIVKRYASESSHAIPVTSDDEALARTTKEVKNDKVHFVWTQFSELHSYLKKQAGDSEILNRRLAEMMSLLTCQKNSSKGKEIKLRATAELKEILSRMDARIQTLYSSLPSNAMLIICTGHGDTAIVQRLRRMLTGPNEANICREKIVEILEEVQARAEVALCFVGVKH 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2818 568 Pfam Exonuclease 215 361 IPR013520 -
Sto9g2818 568 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 4 553 - -
Sto9g2818 568 SMART exoiiiendus 212 371 IPR013520 -
Sto9g2818 568 PANTHER LD29573P 4 553 - -
Sto9g2818 568 SUPERFAMILY Ribonuclease H-like 213 365 IPR012337 -
Sto9g2818 568 Gene3D - 210 371 IPR036397 GO:0003676
Sto9g2818 568 CDD REX1_like 214 363 IPR034922 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2818 Sto-Chr9 29750935 29757773 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2818 230 361 C2H2 Transcription Factor Family AT3G27970 29.333 1.38e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2818 K14570 - gmx:100802793 910.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2818 9 29750935 29757773 Sto9g2818 9 29750935 29757773 ECH