Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2809 ATGTCTACCACAGTCGGTCAGGTTATCAAGTGCAAAGCTGCGGTCTCTTGGGAGGCAGGTAAGCCACTGGTGATTGAAGAAGTAGAAGTAGCACCTCCACAGGCTGGAGAAGTGCGTTTGAAGATCCTCTTTACCTCCCTTTGCCATACTGATGTTTACTTCTGGGAAGCCAAGGGCCAGACTCCATTGTTCCCTCGTATATTTGGTCACGAAGCTGGAGGGATTGTGGAGAGCGTAGGAGAGGGAGTGACTCATCTGAAACCAGGAGATCATGCTCTCCCAGTGTTCACAGGGGAGTGTGGGGATTGCCCACATTGTAAGTCAGAAGAGAGCAACATGTGCGACCTTCTTAGGATCAACACAGACAGGGGTGTCATGATTAACGATGGCAAAACAAGGTTCTCTAAGAATGGACAGCCTATATACCACTTTGTGGGAACATCCACTTTCAGTGAGTACACTGTTGTCCATGCTGGATGTGTCGCAAAAGTCGACCCTGCTGCTCCTCTTGACAAAGTTTGTGTTCTCAGTTGTGGAATCTGCACAGGTTATGGTGCTACTGTGAATGTGGCAAAACCAAAACCTGGTTCCTCTGTAGCCATATTTGGACTAGGAGCTGTTGGCCTTGCTGCTGCTGAAGGAGCTAGAATCTCTGGTGCCTCCAGAATCATTGGGGTTGATTTAAATTCCAGCCGTTTTGAGGAAGCCAAGAAGTTTGGGGTTAACGAGTTTGTGAACCCAAAAGATCATGACAAACCAGTACAAGAGGTTAGTACAAAAAACAAGTTTACTTGGTTTAATGGTGGCCACCAGGTAATCGCCGAGATGACAAATGGAGGAGTGGATCGTGCAGTTGAATGTACTGGGAGCATCCAGGCCATGATCTCAGCATTTGAATGTGTCCACGATGGTTGGGGTGTGGCTGTACTGGTTGGTGTGCCAAACAAGGATGATGCATTCAAAACTCATCCAGTGAATTTCCTGAACGAGAGGACTCTCAAGGGTACCTTCTATGGCAACTACAAACCCCGCACTGATCTTCCTTCTGTGGTGGACCAATACATGAAAGGGGAGCTGGAACTGGAGAAGTTCATCACTCACTCTGTCCCTTTCTCCGAGATTAACAAAGCCTTTGAATACATGCTGAAAGGAGAGTCCATCAGGTGCATCATTCGCATGGAAGAGTAA 1188 0.4756 MSTTVGQVIKCKAAVSWEAGKPLVIEEVEVAPPQAGEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTHLKPGDHALPVFTGECGDCPHCKSEESNMCDLLRINTDRGVMINDGKTRFSKNGQPIYHFVGTSTFSEYTVVHAGCVAKVDPAAPLDKVCVLSCGICTGYGATVNVAKPKPGSSVAIFGLGAVGLAAAEGARISGASRIIGVDLNSSRFEEAKKFGVNEFVNPKDHDKPVQEVSTKNKFTWFNGGHQVIAEMTNGGVDRAVECTGSIQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPVNFLNERTLKGTFYGNYKPRTDLPSVVDQYMKGELELEKFITHSVPFSEINKAFEYMLKGESIRCIIRMEE 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2809 395 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Sto9g2809 395 CDD alcohol_DH_plants 9 392 - -
Sto9g2809 395 Pfam Zinc-binding dehydrogenase 206 347 IPR013149 -
Sto9g2809 395 SUPERFAMILY GroES-like 4 186 IPR011032 -
Sto9g2809 395 Gene3D - 19 385 - -
Sto9g2809 395 PANTHER ALCOHOL DEHYDROGENASE 4 393 - -
Sto9g2809 395 SUPERFAMILY GroES-like 343 392 IPR011032 -
Sto9g2809 395 Pfam Alcohol dehydrogenase GroES-like domain 36 163 IPR013154 -
Sto9g2809 395 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 358 IPR036291 -
Sto9g2809 395 PANTHER ALCOHOL DEHYDROGENASE-RELATED 4 393 - -
Sto9g2809 395 Gene3D - 183 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2809 Sto-Chr9 29690632 29692536 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2809 37 385 Monolignol Biosynthesis Gene Families AT1G72680 24.646 1.38e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2809 K18857 - gmx:100783858 726.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2809 9 29690632 29692536 Sto9g2809 9 29690632 29692536 ECH