Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2807 ATGGAAAGGTTGTGTTTGGGTGGGGTGCTGATGGTGATGTTGGGTGTTTGGGTAGAAGGGTACCCAATTGAGGATTTGGTAGGTAGACTGCCAGGGCAACCCAAGGTTGGGTTTAAGCAATACGCAGGGTATGTGGACGTGGATGTGAAGCATGGAAGGAGTCTTTTTTACTACTTTGTCGAAGCTGAAAACGAGCCTGACGTCAAGCCTCTAACACTATGGCTCAATGGAGGGCCAGGATGTTCCTCCATTGGAGGAGGTGCCTTTACTGAATTGGGTCCTTTCTTTCCCAGAGGCGATGGCCGTGGTCTCCGAACAAATTCCAAATCTTGGAACAGAGtctCCAATCTCCTATTTGTGGAGTCTCCTGCTGGAGTTGGTTGGTCATACTCAAATACTTCTTCTGATTATAACTGTGGAGATGCGTCCACTGCCAATGATATGTATTTGTTCATGCTGAAATGGTACGAGAAATTTCCAACGTTTCGATCAAGGGAACTCTTCCTTACTGGAGAAAGCTATGCAGGACATTACATACCACAGTTGGCTAATGTACTATTGGACCATAACGCTGCTTCCCATGGTTTCAAATTCAATATCAAAGGAGTTGCTTCATGCATTGAAGCCATAAATGAAGCATACGACGTCGTAGGACGTTATATAAACGATTATGACGTCATCCTCGATGTTTGCTATCCCTCCATTGTTGAGCAAGAACTCAGATTGAAAAAGACGGCTACTAAAATAAGCATAGGCGTTGATgtttgtatgacttatgaaagaAGCTTTTACTTCAACCTCCCTGAGGTTCAGAAGGCTCTCCATGCAAACCGTACCAATCTACCTTATGATTGGTCTATGTGTAGTGGATCTTATTTAAACTATAACGAATTGGATGGTAGCATCAACATCCTTCCCATTCTCCGAAAGATAGTTCAAAATGACATCCCAGTTTGGGTTTTCAGTGGAGACCAGGATTCGGTGGTGCCATTGCTGGGTTCGAGAACACTGGTTAGAGAACTGGCGGAGGAGATGAAGTTGAAGATCACAGTGCCATATGGAGCTTGGTTCGACAAAGGCCAGGTAGGAGGATGGGTAACAGAGTATGGAAAATTGTTGACATTTGCGACGGTTAGAGGTGCTGCTCACATGGTGCCATATGCACAGCCATCAAGAGCATTGCGTCTTTTTGCTTCCTTTGTGCGAGGACAAAGGTTGCCCAACACAACGCATCCTCCCATTGATGACTTATTTTGA 1257 0.4431 MERLCLGGVLMVMLGVWVEGYPIEDLVGRLPGQPKVGFKQYAGYVDVDVKHGRSLFYYFVEAENEPDVKPLTLWLNGGPGCSSIGGGAFTELGPFFPRGDGRGLRTNSKSWNRVSNLLFVESPAGVGWSYSNTSSDYNCGDASTANDMYLFMLKWYEKFPTFRSRELFLTGESYAGHYIPQLANVLLDHNAASHGFKFNIKGVASCIEAINEAYDVVGRYINDYDVILDVCYPSIVEQELRLKKTATKISIGVDVCMTYERSFYFNLPEVQKALHANRTNLPYDWSMCSGSYLNYNELDGSINILPILRKIVQNDIPVWVFSGDQDSVVPLLGSRTLVRELAEEMKLKITVPYGAWFDKGQVGGWVTEYGKLLTFATVRGAAHMVPYAQPSRALRLFASFVRGQRLPNTTHPPIDDLF 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2807 418 PRINTS Carboxypeptidase C serine protease (S10) family signature 107 119 IPR001563 GO:0004185|GO:0006508
Sto9g2807 418 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 130 IPR001563 GO:0004185|GO:0006508
Sto9g2807 418 PRINTS Carboxypeptidase C serine protease (S10) family signature 155 180 IPR001563 GO:0004185|GO:0006508
Sto9g2807 418 PRINTS Carboxypeptidase C serine protease (S10) family signature 373 386 IPR001563 GO:0004185|GO:0006508
Sto9g2807 418 SUPERFAMILY alpha/beta-Hydrolases 17 410 IPR029058 -
Sto9g2807 418 Pfam Serine carboxypeptidase 32 204 IPR001563 GO:0004185|GO:0006508
Sto9g2807 418 Pfam Serine carboxypeptidase 219 403 IPR001563 GO:0004185|GO:0006508
Sto9g2807 418 ProSitePatterns Serine carboxypeptidases, serine active site. 169 176 IPR018202 GO:0004185
Sto9g2807 418 Gene3D - 304 403 - -
Sto9g2807 418 Gene3D alpha/beta hydrolase 23 256 IPR029058 -
Sto9g2807 418 PANTHER CARBOXYPEPTIDASE 12 204 - -
Sto9g2807 418 PANTHER CARBOXYPEPTIDASE 204 410 - -
Sto9g2807 418 Gene3D - 257 292 - -
Sto9g2807 418 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 204 410 IPR001563 GO:0004185|GO:0006508
Sto9g2807 418 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 12 204 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2807 Sto-Chr9 29679539 29682284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2807 263 406 Calmodulin-binding Proteins AT2G22960 25.694 1.64e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2807 K16297 - gmx:100815723 682.945