Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2795 ATGACAAGCAATGCAATAACTCTTTTCATCTTGTTTCTTAATATCTCCTTGTTTCCAGTCATCTCTGCTCTGAACCAGGAAggtctctctcttctttcatgGCTCTCAACCTTCAATTCCTCTGATTCTGCTTCTTCATTTTCCTCATGGAACGCAACCCACGAAAATCCTTGCTCATGGGATTACATAAAATGTTCCAAGGATGGTTTTGTTTCACATATCATAATAACCTCCATTAATCTTGGTAGCAGCTTCCCTACACAACTCCTCTCATTCAACCACCTTACCACTCTTGTCATCTCAAATGGAAATCTCACTGGTGAAATTCCAAGTTCAGTAGGAAACTTTTCTTCCATAACAACTCTGGACCTTAGCTTCAATTCCTTATCAGGAACCATTCCAACTGAAATAGGAAAGCTGTCTAATTTACAATGGTTATCTTTGAATTCAAATTCCTTAAATGGTGGAATTCCAATAGAAATTGGAAACTGTTCAAAGCTTCAAGAACTTGAATTGTTTGACAACCAGCTCTCTGGTATTCATGGTGAAATTCCAAAGAAGATATCAAACTGTAAAGCTTTAATGTTTCTGGGGCTTTCAAACACTGGAATATCAGGGGAGATTCCACCAAGTATTGGGGAACTTGTGCATCTGAAGACACTTTCAGTTTACACAGCAAATCTCACAGGTCACATTCCACCAGAGATTCATAATTGTTCAGCCTTGGAGAACTTGTTTCTATATGAAAACCAACTTTCTGGGAATATTCCTTCTGAATTGGGTTTCATGAAAAGCCTCAAGAAGATATTTCTATGGCAGAACAATTTGACTGGTTCAATTCCAGAAAGCATGGGGAACTGTACAGGTTTGATGGTTATTGATTTCTCATTAAATTCTCTGGTTGGTCAGCTTCCTGTTACTCTCAAAAACTTACTTTCATTGGAGGAGCTTCTTTTATCTAGTAATGACATTTCTGGAGAGATACCTTTCTATATAGGTAACTTCTCTAGATTGAAGCGAATAGAGTTTGATAACAACATATTCTCTGGGAAGATTCCACCTGTTATGGGACAACTGAAGGAACTAACTCTATTCTTAGCCTGGCAGAATCAGCTCCAAGGAAGTATACCAACAGAACTATCCAACTGTGAGAAACTTGAAGAACTTGATCTCTCACACAATTCCCTCACGGGTTCAATTCCAAATTCTCTTTTTCATCTTGAGAATTTAACTCAGTTATTGCTGATATCAAATAAACTTTCAGGTCAAATCCCACCAGATATTGGCAGTTGTACCAGCTTGATCAGGTTAAGGCTAGGATCAAACAACTTCACAGGTCTAATCCCCCCAGAAATAGGCCTTTTGAAAAGTTTGAGCTTTCTTGAATTATCAGATAACATGCTCAACGGAGAAATCCCCCACGAGATTGGTAATTGCAATAATCTTGAAATGCTTGACTTGCATGGGAATGAGCTGAGAGGAACCATTCCTTTCTCGTTTGAATTCCTGGTGGGTCTTAATGTTCTAGATCTTTCTGCCAACAAAATAACTGGCAGAATTCCTGAGACTTTAGGCAAGCTTACATCTTTGAATAAGTTAATAATCAGTGGCAACCATATCACAGGTTTGATCCCTTCATCTCTTGGCCTTTGTAAGGATTTGCAGTTGCTAGATATAAGCAACAATAGAATAACTGGTTCTATTCCAGATGAAATTGGTCACTTGCAAGGTTTGGATATAATGTTGAACTTGAGTTGGAACTCCCTAAGCGGGTCAATTCCACAAAGCTTCTCAGATCTCTCCAAACTTTCCAATTTGGACCTTACTCACAATAACCTGTCAGGAAGTCTCGCTATACTTGGTAGTCTTGACAATCTAGTATCTCTGAATGTGTCTTTCAATTGTTTCTCTGGTTCTCTTCCTGATTCAAAGTTCTTCCGAGATATACCCCTCAGTTCATTTGCTGGTAACCCTAATCTCTGCATGAACAAGTACTGTCAAGTGACTGGAAATCACGACGACATTAAATCTATAAGAAAggttattatatatacttttcttGGAGTTATTTTAGCAGCCATGTTTGTGACTTTTGGAGTAATTTTAGGTCTCAGAATTCGAGGGAGGAATTTTGATGAGGAAGGCAAAATGGATTGGGCTTTCACTCCATTTCAGAAACTCAACTTCTCCATCAACGACATTGTCACACAGTTATCAGATTCCAACATTGTGGGAAAGGGTTGCTCAGGGATTGTTTATAAGGTAGAGACTCCCACAAAGCAAGTGATTGCAGTGAAGAAGCTATGGCCCATAAAGAAGGAGGAGTCGTCACCCGGGAGAGATCAGTTTGCTGCAGAAGTTCAGACTCTTGGATCAATAAGACATAAAAATATAGTGAGACTTCTAGGATGCTGCGACAATGGAAAAACCAGATTACTCTTGTTTGATTATATATGTAATGGGAGTTTGTACGGATTGCTCCATGAAAAGAGATTGTTCTTAGATTGGGACGCAAGGTATAAGATCATAGTAGGAGCAGCTCATGGTTTAGAGTATCTTCATCATCATTGCATCCCTCCAATTGTCCATCGGGACGTTAAGGCTAACAACATCTTGGTAGGACCACAATATGAAGCTTTTCTTGCAGATTTTGGCCTTGCAAAAATAGTTAATTCTTCCGAGTGCTCAAGAGCCTCTGCTACAATTGCTGGTTCTTATGGGTACATTGCTCCTGAATATGGATACAGTTTGAGAATAACAGAGAAGAGTGATGTGTACAGTTTTGGGGTGGTACTCCTAGAGGTGTTAACGGGGATGGAGCCAACTGATGATAGGATACCAGAGGGGGCCCACATAGTGAGCTGGGTTAGCAGTGAAATCCGAGAGAAGAAAAGAGACTTGATCACCATTCTTGAGGAGAGGCTAGTATTGCAATGTGGAACAAAAACCCCAGAGATGGTTCAAGTGCTAGGGGTGGCTCTCCTATGTGTGAATCCATCCCCAGAAGAACGACCCACCATGAAAGATGTAAGGACGATGCTCAAGGAGATCACACACCATAATGACCATCTCCATAAGCCCAATTTTCTGCATAAAGGACTAGTCACCAATCCAAAAACAGCAGCTAGCTGTTCAAGTTTTTCCAGATCATGCCAGCCTCTAATGGACTCATccttgtcttcttcttcataG 3192 0.3938 MTSNAITLFILFLNISLFPVISALNQEGLSLLSWLSTFNSSDSASSFSSWNATHENPCSWDYIKCSKDGFVSHIIITSINLGSSFPTQLLSFNHLTTLVISNGNLTGEIPSSVGNFSSITTLDLSFNSLSGTIPTEIGKLSNLQWLSLNSNSLNGGIPIEIGNCSKLQELELFDNQLSGIHGEIPKKISNCKALMFLGLSNTGISGEIPPSIGELVHLKTLSVYTANLTGHIPPEIHNCSALENLFLYENQLSGNIPSELGFMKSLKKIFLWQNNLTGSIPESMGNCTGLMVIDFSLNSLVGQLPVTLKNLLSLEELLLSSNDISGEIPFYIGNFSRLKRIEFDNNIFSGKIPPVMGQLKELTLFLAWQNQLQGSIPTELSNCEKLEELDLSHNSLTGSIPNSLFHLENLTQLLLISNKLSGQIPPDIGSCTSLIRLRLGSNNFTGLIPPEIGLLKSLSFLELSDNMLNGEIPHEIGNCNNLEMLDLHGNELRGTIPFSFEFLVGLNVLDLSANKITGRIPETLGKLTSLNKLIISGNHITGLIPSSLGLCKDLQLLDISNNRITGSIPDEIGHLQGLDIMLNLSWNSLSGSIPQSFSDLSKLSNLDLTHNNLSGSLAILGSLDNLVSLNVSFNCFSGSLPDSKFFRDIPLSSFAGNPNLCMNKYCQVTGNHDDIKSIRKVIIYTFLGVILAAMFVTFGVILGLRIRGRNFDEEGKMDWAFTPFQKLNFSINDIVTQLSDSNIVGKGCSGIVYKVETPTKQVIAVKKLWPIKKEESSPGRDQFAAEVQTLGSIRHKNIVRLLGCCDNGKTRLLLFDYICNGSLYGLLHEKRLFLDWDARYKIIVGAAHGLEYLHHHCIPPIVHRDVKANNILVGPQYEAFLADFGLAKIVNSSECSRASATIAGSYGYIAPEYGYSLRITEKSDVYSFGVVLLEVLTGMEPTDDRIPEGAHIVSWVSSEIREKKRDLITILEERLVLQCGTKTPEMVQVLGVALLCVNPSPEERPTMKDVRTMLKEITHHNDHLHKPNFLHKGLVTNPKTAASCSSFSRSCQPLMDSSLSSSS 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2795 1063 ProSiteProfiles Leucine-rich repeat profile. 553 575 IPR001611 GO:0005515
Sto9g2795 1063 SMART serkin_6 738 1018 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2795 1063 SMART LRR_typ_2 263 287 IPR003591 -
Sto9g2795 1063 SMART LRR_typ_2 311 335 IPR003591 -
Sto9g2795 1063 SMART LRR_typ_2 383 406 IPR003591 -
Sto9g2795 1063 SMART LRR_typ_2 527 550 IPR003591 -
Sto9g2795 1063 SMART LRR_typ_2 455 479 IPR003591 -
Sto9g2795 1063 SMART LRR_typ_2 165 187 IPR003591 -
Sto9g2795 1063 SMART LRR_typ_2 575 599 IPR003591 -
Sto9g2795 1063 SMART LRR_typ_2 140 164 IPR003591 -
Sto9g2795 1063 SMART LRR_typ_2 407 431 IPR003591 -
Sto9g2795 1063 SMART LRR_typ_2 600 623 IPR003591 -
Sto9g2795 1063 SMART LRR_typ_2 503 526 IPR003591 -
Sto9g2795 1063 Pfam Protein kinase domain 741 1010 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2795 1063 Pfam Leucine rich repeat 481 540 IPR001611 GO:0005515
Sto9g2795 1063 Pfam Leucine rich repeat 265 324 IPR001611 GO:0005515
Sto9g2795 1063 Pfam Leucine rich repeat 94 153 IPR001611 GO:0005515
Sto9g2795 1063 Pfam Leucine rich repeat 554 613 IPR001611 GO:0005515
Sto9g2795 1063 PANTHER LRR RECEPTOR-LIKE KINASE 3 1035 - -
Sto9g2795 1063 ProSitePatterns Serine/Threonine protein kinases active-site signature. 861 873 IPR008271 GO:0004672|GO:0006468
Sto9g2795 1063 Gene3D Ribonuclease Inhibitor 181 373 IPR032675 -
Sto9g2795 1063 SUPERFAMILY Protein kinase-like (PK-like) 735 1037 IPR011009 -
Sto9g2795 1063 Gene3D Ribonuclease Inhibitor 374 670 IPR032675 -
Sto9g2795 1063 Pfam Leucine rich repeat N-terminal domain 25 66 IPR013210 -
Sto9g2795 1063 SUPERFAMILY RNI-like 80 397 - -
Sto9g2795 1063 Pfam Leucine Rich Repeat 385 407 IPR001611 GO:0005515
Sto9g2795 1063 Gene3D Phosphorylase Kinase; domain 1 710 817 - -
Sto9g2795 1063 ProSitePatterns Protein kinases ATP-binding region signature. 744 772 IPR017441 GO:0005524
Sto9g2795 1063 Gene3D Ribonuclease Inhibitor 24 180 IPR032675 -
Sto9g2795 1063 ProSiteProfiles Leucine-rich repeat profile. 385 407 IPR001611 GO:0005515
Sto9g2795 1063 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 3 1035 - -
Sto9g2795 1063 PRINTS Leucine-rich repeat signature 386 399 - -
Sto9g2795 1063 PRINTS Leucine-rich repeat signature 600 613 - -
Sto9g2795 1063 SUPERFAMILY RNI-like 244 628 - -
Sto9g2795 1063 Gene3D Transferase(Phosphotransferase) domain 1 818 1033 - -
Sto9g2795 1063 ProSiteProfiles Protein kinase domain profile. 738 1014 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2795 Sto-Chr9 29633519 29637068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2795 23 1045 Receptor kinase-like Gene Family AT5G56040 44.837 0.0 878
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto9g2795 Pkinase 3.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2795 - - gmx:100807225 1613.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2795 9 29633519 29637068 Sto9g2795 9 29633519 29637068 ECH