Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2790 ATGTTCTCAGCAGTGTTCATGATTGGAGCAATGTTCCTGTGTGTTGGAGGCGAGCCAGTGGAAGATAAACGAGCCTTGCTTGATTTCCTTCACAACATAAATCACTCTCATCCTCTGAATTGGGATCAGAAGTCTTCAGTATGCAATAGTTGGAGAGGAGTGACCTGTAATAGTGACCAATCCAGAGTCATAGCCCTTCATTTACCTGCAGCTGGATTAAGTGGTCCAATCCCACACAACACAATAAGTCGCCTCTCAGCACTTCAGAATTTGAGTCTTAGATCCAATAGCATAACGGGTGCTTTTCCTTCTGCTTTCTCTCAGCTTAAGAACTTAACCTACCTTTATATTCAATTCAACAACTTTTCTGGTCCATTGCCATTAGATTTCTCTGTTTGGAACAATCTTACTGTTGCTGATTTATCCAACAATTCTTTCAATGGAACCATTCCTTCTTCCATTTCAAATTTGACTCATCTCACATCTTTAATCCTTGCTAATAACTCGCTTTCTGGTGAAATTCCTGATCTCAATATTCCTACCCTGCAAGAGCTGAATTTAGCCAACAATAACCTTACTGGGGTTGTGCCTAAATCTCTTATGAGATTCCCAAGTTGGGCTTTTTCTGGAAGACGTCAAAATGCCCCATTGAAGTCCCATAAAAAGGAAGTCTCTCTGAAAACAGATGTTTCTGAGAGTCAAGAAAACAACAAGATTGTGTTCTTTGAAGGTTGCAATCTTGCGTTTGACCTGGAGGATTTGCTGAGAGCATCCGCTGAGGTGCTTGGGAAGGGGACCTATGGCACAACATACAAGGCTGCTCTGGAGGATGCAACCACCGTAGTGGTGAAGAGATTGAAGGAAATCACCGCCGGAAAACGCGAGTTCGAACAGCAGATGGAGGTGGTGGGGATGATTAGGCACCACAATGTGACTTCTCTAAGGGCATATTACTATTCCAAGGAGGAGAAACTCATGGTCTATGACTATTATGAACACAGTAGCGTTTCTGCTATGTTGCATGGTAAAAGAGGGGAAGGAAGGACATCATTAGACTGGGATACCAGGCTGAGAATTGCAATAGGGGCAGCAAGAGGCATTGCTCACATACATGATCAACAAGGAGGGAGACTCATCCATGGAAACATAAAAGCCTCAAACATCTTCCTCAACTCCCAAGGATATGGTTGCATTTCTGACATTGGTCTATTAACACTGATGAGTCCAATGCTGCCACCAGCACTAAGAACTTCAGGGTACCGTGCCCCTGAAGTAACCGAAACCCGAAAAGCAAGCCACGCAATGGATGTGTACAGTTATGGGGTGTTGCTGCTAGAGCTTCTCACGGGAAAATCCCCCATACATACCACAGGAAGTGAGGAGGTAGTCCACCTGGTGAGGTGGGTGAACTCTGTGGTGAGAGAGGAGTGGACAGCAGAGGTGTTTGATGTGGAATTACTGAGATATCCCAACATAGAGGAAGAAATGGTAGAGATGTTACAACTGGGTATGGCTTGTGTGGCAAGGACGCCAGAGCAGAGACCAAAAATGGTAGATGTGTTAAGAATGGTGGAGGAAATTCGTCGAGCAAATACTGGGAATCGACCATCCACTGAATCTAGATCAGAAGCTTCTACCCCAACCCCACAAGCAAATGAGTAG 1662 0.4458 MFSAVFMIGAMFLCVGGEPVEDKRALLDFLHNINHSHPLNWDQKSSVCNSWRGVTCNSDQSRVIALHLPAAGLSGPIPHNTISRLSALQNLSLRSNSITGAFPSAFSQLKNLTYLYIQFNNFSGPLPLDFSVWNNLTVADLSNNSFNGTIPSSISNLTHLTSLILANNSLSGEIPDLNIPTLQELNLANNNLTGVVPKSLMRFPSWAFSGRRQNAPLKSHKKEVSLKTDVSESQENNKIVFFEGCNLAFDLEDLLRASAEVLGKGTYGTTYKAALEDATTVVVKRLKEITAGKREFEQQMEVVGMIRHHNVTSLRAYYYSKEEKLMVYDYYEHSSVSAMLHGKRGEGRTSLDWDTRLRIAIGAARGIAHIHDQQGGRLIHGNIKASNIFLNSQGYGCISDIGLLTLMSPMLPPALRTSGYRAPEVTETRKASHAMDVYSYGVLLLELLTGKSPIHTTGSEEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEEMVEMLQLGMACVARTPEQRPKMVDVLRMVEEIRRANTGNRPSTESRSEASTPTPQANE 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2790 553 ProSiteProfiles Protein kinase domain profile. 256 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2790 553 Gene3D Phosphorylase Kinase; domain 1 221 330 - -
Sto9g2790 553 MobiDBLite consensus disorder prediction 531 553 - -
Sto9g2790 553 PANTHER LRR RECEPTOR-LIKE KINASE 7 211 - -
Sto9g2790 553 PANTHER LRR RECEPTOR-LIKE KINASE 216 551 - -
Sto9g2790 553 SUPERFAMILY Protein kinase-like (PK-like) 260 525 IPR011009 -
Sto9g2790 553 Pfam Leucine rich repeat 77 122 IPR001611 GO:0005515
Sto9g2790 553 Pfam Protein kinase domain 259 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2790 553 ProSitePatterns Protein kinases ATP-binding region signature. 262 293 IPR017441 GO:0005524
Sto9g2790 553 Pfam Leucine Rich Repeat 182 200 IPR001611 GO:0005515
Sto9g2790 553 MobiDBLite consensus disorder prediction 528 553 - -
Sto9g2790 553 SUPERFAMILY L domain-like 32 203 - -
Sto9g2790 553 Pfam Leucine rich repeat N-terminal domain 21 57 IPR013210 -
Sto9g2790 553 Gene3D Ribonuclease Inhibitor 20 213 IPR032675 -
Sto9g2790 553 Gene3D Transferase(Phosphotransferase) domain 1 332 547 - -
Sto9g2790 553 PANTHER OS05G0588300 PROTEIN 216 551 - -
Sto9g2790 553 PANTHER OS05G0588300 PROTEIN 7 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2790 Sto-Chr9 29595613 29597500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2790 4 546 Receptor kinase-like Gene Family AT5G53320 54.377 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sto9g2790 Pkinase 1.8e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2790 - - gmx:100813065 776.163