Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2786 ATGGAACAGAGCATCCTATGCAAATACACAGTGCACCACAGCCTTACCAAGAAGCACGCCAGCAAGCCCTCCGATGTGGAGCCCCGAGTGGTACGCATCTCCGTCACTGATCCAGATGCCACAGACTCCTCCAGCGACGACGAACCACACTTCCTCTCTCGCCCCAGAGTGAAGCGCTATGTCAACCAAATTGACATCGAAACCTCCACCACCGTGAAAAACGCCACCACCAATGGCCGGAAGAGGCCCGCCGGAGACACCGAGTCGTGCCGGCGGCCGGTGAAGGCCTCCACAACCAACAACGGCAGGAAGTTCCGAGGCGTACGGCAAAGACCGTGGGGGAAATGGGCGGCGGAGATTCGAGATCCCGCGAGACGCGTACGCCTCTGGCTGGGCACGTACGACACGGCGGAGGAAGCAGCCATGGTGTACGACAATGCAGCGATTAAGCTGCGAGGCCCCGACGCCTTAACGAACTTCGTAACTCCGccgaagagagagaaggaaggagaagaagaggaagcgAAGGCAGAGATGATGAAGGTGTCAGTGAAAACAGAAGCATCTGGTTCAGGTTCAGGGTACTACGACTCAGGGGATGAAGCACATAATCTTTCATCCCCCACATCGGTGCTTCAATTCAGGAGCAATTGCAGTGAGATGATGAAAGAGGGCCGTGAAAAGGGGAGAATAGAAGGGGAAGAAGAGGTATTTGGGGAATGTGAAGGGGAAATGGGGTTGTGGGAGGAGAATTGGAGGATGGAGATGCCGGTGTGGGATGACGTGTTTACGAATTTCCCAACGCCAGAGTACTCATCGGTGATGTTGGAGGAAGAGCCGTGGGAGTTGTTTTGTGAAACGACGAAGGTTCTGGAGGATGAGATAGATTTGGAGAGAATGTATTCACCATCCAGGATGTGCCAAGTGGACGATTACTTCCAAGACATATTGTTGGGGTCAGATCCTCTGCTGTGGCGATATGAGCATGAGCGCTTCTGCGGATTGCTTCAGCATTACTTCAAGAGTGTGAGTGAGAAAGCTAGCGGTCATGCATATTGa 1059 0.5194 MEQSILCKYTVHHSLTKKHASKPSDVEPRVVRISVTDPDATDSSSDDEPHFLSRPRVKRYVNQIDIETSTTVKNATTNGRKRPAGDTESCRRPVKASTTNNGRKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNAAIKLRGPDALTNFVTPPKREKEGEEEEAKAEMMKVSVKTEASGSGSGYYDSGDEAHNLSSPTSVLQFRSNCSEMMKEGREKGRIEGEEEVFGECEGEMGLWEENWRMEMPVWDDVFTNFPTPEYSSVMLEEEPWELFCETTKVLEDEIDLERMYSPSRMCQVDDYFQDILLGSDPLLWRYEHERFCGLLQHYFKSVSEKASGHAY 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2786 352 SMART rav1_2 104 167 IPR001471 GO:0003700|GO:0006355
Sto9g2786 352 PRINTS Ethylene responsive element binding protein signature 105 116 IPR001471 GO:0003700|GO:0006355
Sto9g2786 352 PRINTS Ethylene responsive element binding protein signature 127 143 IPR001471 GO:0003700|GO:0006355
Sto9g2786 352 MobiDBLite consensus disorder prediction 68 106 - -
Sto9g2786 352 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF4-LIKE 14 279 - -
Sto9g2786 352 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 14 279 - -
Sto9g2786 352 MobiDBLite consensus disorder prediction 15 54 - -
Sto9g2786 352 MobiDBLite consensus disorder prediction 68 83 - -
Sto9g2786 352 Pfam AP2 domain 104 153 IPR001471 GO:0003700|GO:0006355
Sto9g2786 352 MobiDBLite consensus disorder prediction 188 209 - -
Sto9g2786 352 CDD AP2 104 160 IPR001471 GO:0003700|GO:0006355
Sto9g2786 352 ProSiteProfiles AP2/ERF domain profile. 104 161 IPR001471 GO:0003700|GO:0006355
Sto9g2786 352 SUPERFAMILY DNA-binding domain 104 161 IPR016177 GO:0003677
Sto9g2786 352 Gene3D AP2/ERF domain 103 162 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2786 Sto-Chr9 29572124 29576396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2786 3 220 AP2-EREBP Transcription Factor Family AT4G27950 47.748 1.75e-57 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sto9g2786 AP2 6.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2786 - - gmx:100807598 311.997