Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2780 ATGAGCTACTACGAGAAGATCATAGCTACATTTGAAAACACACTAGCCATCCTCAACTACAATAATACTATTTCTCCATTACTGAGAGTTGGCGAATCCTCAAAACACCCCCCACCCCCAGGAAGAAAGACATTGGCAAGATGGACGAAACAGATTAGAGTTAGCCCAGGGATGGGAGTAGAAGCGCCTCTGGACGATGGGTTTAGTTGGAGAAAATACGGGCAGAAAGACATTCTTGGAGCCAAATTCCCAAGAGGGTATTATAGATGCagccatagaaatgtgcaaggGTGTTTGGCCACAAAGCAAGTGCAACGATCCGATGAAGATCCAAGTATCTTCGAAATCACGTACAGGGGAAACCACACTTGCACACTCGCCTCCAACCTGCCTTCTCCACTACATCCTAGGGAATCACGAGAACAACTTGTGAACCTCCGGGAAGGTCTCAAACTCCTCACCCACAACCTAGATGCTTCCGACCAGACATCATTTGCTTCATTCctaacttccacttccacttccaccatCAAAGCCGAAGAAAAGCAAGACTTTTTGTCTCCTGCGCTTCAAACATTTGGGTCCCCTGCTACTTCCGGAACAACCCACTTCTCTGTTTCTCCAACAAGTGTCAATGACTTTGGGTTTGGAGATCACCAATATTTGGCAACTTCTGGATCTCACGCCGTCTCCGCCTCACCTGTAAACTCTCCCACCGTTGGATCCGACTTCCCCTTTGATAATTTCCAATTTGACGCTCATAACCTCACCTTTGATGACTCAAAATTCTTCTAA 795 0.4377 MSYYEKIIATFENTLAILNYNNTISPLLRVGESSKHPPPPGRKTLARWTKQIRVSPGMGVEAPLDDGFSWRKYGQKDILGAKFPRGYYRCSHRNVQGCLATKQVQRSDEDPSIFEITYRGNHTCTLASNLPSPLHPRESREQLVNLREGLKLLTHNLDASDQTSFASFLTSTSTSTIKAEEKQDFLSPALQTFGSPATSGTTHFSVSPTSVNDFGFGDHQYLATSGSHAVSASPVNSPTVGSDFPFDNFQFDAHNLTFDDSKFF 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2780 264 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED 41 262 - -
Sto9g2780 264 Gene3D WRKY domain 57 127 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto9g2780 264 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 41 262 IPR044810 GO:0003700
Sto9g2780 264 SUPERFAMILY WRKY DNA-binding domain 62 126 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto9g2780 264 SMART WRKY_cls 64 126 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g2780 264 Pfam WRKY DNA -binding domain 65 124 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g2780 264 ProSiteProfiles WRKY domain profile. 59 127 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2780 Sto-Chr9 29531052 29532229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2780 5 134 WRKY Transcription Factor Family AT5G24110 49.275 2.69e-45 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto9g2780 WRKY 1.4e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2780 - - gmx:100776906 249.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g1131 6 10856260 10876377 Sto9g2780 9 29531052 29532229 ECH
Sto6g3129 6 38102733 38103993 Sto9g2780 9 29531052 29532229 ECH
Sto9g2780 9 29531052 29532229 Sto9g2780 9 29531052 29532229 ECH