Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sto9g2780 | ATGAGCTACTACGAGAAGATCATAGCTACATTTGAAAACACACTAGCCATCCTCAACTACAATAATACTATTTCTCCATTACTGAGAGTTGGCGAATCCTCAAAACACCCCCCACCCCCAGGAAGAAAGACATTGGCAAGATGGACGAAACAGATTAGAGTTAGCCCAGGGATGGGAGTAGAAGCGCCTCTGGACGATGGGTTTAGTTGGAGAAAATACGGGCAGAAAGACATTCTTGGAGCCAAATTCCCAAGAGGGTATTATAGATGCagccatagaaatgtgcaaggGTGTTTGGCCACAAAGCAAGTGCAACGATCCGATGAAGATCCAAGTATCTTCGAAATCACGTACAGGGGAAACCACACTTGCACACTCGCCTCCAACCTGCCTTCTCCACTACATCCTAGGGAATCACGAGAACAACTTGTGAACCTCCGGGAAGGTCTCAAACTCCTCACCCACAACCTAGATGCTTCCGACCAGACATCATTTGCTTCATTCctaacttccacttccacttccaccatCAAAGCCGAAGAAAAGCAAGACTTTTTGTCTCCTGCGCTTCAAACATTTGGGTCCCCTGCTACTTCCGGAACAACCCACTTCTCTGTTTCTCCAACAAGTGTCAATGACTTTGGGTTTGGAGATCACCAATATTTGGCAACTTCTGGATCTCACGCCGTCTCCGCCTCACCTGTAAACTCTCCCACCGTTGGATCCGACTTCCCCTTTGATAATTTCCAATTTGACGCTCATAACCTCACCTTTGATGACTCAAAATTCTTCTAA | 795 | 0.4377 | MSYYEKIIATFENTLAILNYNNTISPLLRVGESSKHPPPPGRKTLARWTKQIRVSPGMGVEAPLDDGFSWRKYGQKDILGAKFPRGYYRCSHRNVQGCLATKQVQRSDEDPSIFEITYRGNHTCTLASNLPSPLHPRESREQLVNLREGLKLLTHNLDASDQTSFASFLTSTSTSTIKAEEKQDFLSPALQTFGSPATSGTTHFSVSPTSVNDFGFGDHQYLATSGSHAVSASPVNSPTVGSDFPFDNFQFDAHNLTFDDSKFF | 264 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sto9g2780 | 264 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED | 41 | 262 | - | - | |
Sto9g2780 | 264 | Gene3D | WRKY domain | 57 | 127 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Sto9g2780 | 264 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 41 | 262 | IPR044810 | GO:0003700 | |
Sto9g2780 | 264 | SUPERFAMILY | WRKY DNA-binding domain | 62 | 126 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Sto9g2780 | 264 | SMART | WRKY_cls | 64 | 126 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Sto9g2780 | 264 | Pfam | WRKY DNA -binding domain | 65 | 124 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Sto9g2780 | 264 | ProSiteProfiles | WRKY domain profile. | 59 | 127 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sto9g2780 | Sto-Chr9 | 29531052 | 29532229 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sto9g2780 | 5 | 134 | WRKY Transcription Factor Family | AT5G24110 | 49.275 | 2.69e-45 | 152 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Sto9g2780 | WRKY | 1.4e-27 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sto9g2780 | - | - | gmx:100776906 | 249.98 |