Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2767 ATGGCAGTAAATGGGATTTCATCTTCAACCCAACCCTTAATTCCTTTCTTTAAGGGTGAGAACTACGAATTCTGGAGCATAAAAATGCGCACTTTGTTTATGTCTCAAGAATTGTGGGAGCTGGTTGAACATGGGTATAGTGCTTCAGAAGCTGATGAGCAAAAGCTTCGTGAAAACAAGAAGAAGGATGCAAGGGCTCTGTTCTTCCTTCAGCAAGCTGTCTCAGACGATATCTTCTCACGAATTTCAGCAGCAACTACCTCAAAGGGGGCGTGGCAGACTCTCAAAACAGAATTCCAAGGCTCCTCAAAGGTAATTACTGTGAAACTTCAGTCTCTCCGTAGAACATTTGAAATGCTGCAAATGGGTAACTCAGAAACTGTTCAAGTATTTTTATCGAGAGCTTCTGCTATTGTCTCTCAAATGAAGGCATATGGTGAGAAAATTACAGATGAGACTGtggttttaaaattattgagaAGTCTAACCCCTAAATTTGATCATGTGGTTGCTGCAATAGAGGAATCTAAAGATTTTGCTACTTATTCCTTTGATGATTTAATGGGTTCTTTGCAAGCTCATGAAGATAGGTTAAATAAATCATCAACAAGGATTGAAGAAAAGGCATTTCAAGTGAAAGGAGAGTCCTCCCACACAAAGTCCGATGGCAACGTTTCAAATAGAAGCACTTCACGTGGTGGTTATCATGCTCGAGGTCGTGGCGGCAACCGTGGACGAGGAGGACGTTCTGGTGAACAACGACAGGtcaaaaataattcaattaaatgttATTATTGTGGAAAGATTGGTCACAAAGAAGCTGACTGTTGGACCAAGCAAAGGAATGAAGAAAAGCATGCCAATGTtgctgaagaagaagagagtatGTTGTTTATGGctcatttttttgataaaaattttgcTAATGCTGTTTGGTTTCTGGATAGTGGGTGTTCTAATCACATGACGGGCTCAAAGCAATTGTTTAAAGAGCTTGACGAGAAAGAGACATCAACAGTTCGATTGGGTGATGACAAGGTGATTCAAGTGGAAGGGAAAGAACATGTTGGGTGGTGGAATAACAGCTGTCCACTACCTGAAACAACATGTGGAGACCTTGTCATACGTTTTCCTTTTCGAATCAAAGGTCGCCAACCACAACGTTGTGGTTATCCTGGGTTTGCTTTAGAATGCACCCCAACTAATCACCCTCTTCTTGAGCTTCCTTATTCAGTGAAGCTCACTGTCAAACACATTAATTACAAATCCCAAACAATTGATTTGTATGATCCTTCATCTCCCTGCCTTTATAGCAAGCTTGAGAACCTCAACGTCTCTGCTTCTCCTTTCCAGTTCACAGATGACTATTATTATGCCCATACCTTCTTCAATTGCACACCTGAAGATAGAGGATTGACCAGAGCTTCATGTTTGAGTAGCCCTGCCTATCAAGTATATGCCATTCCCCACTTCAGTAATATGGCATCTTATCCAATATCATTTTGCAGCATAATGTTCACCATTCCTTCCCTCCCATATGATTTTTTTCAAGAGGAAAACATGCTTCATTTGATGTGGTCTGATCCAATGTGTAAACATTGCGaatcaaaaggaaaaatatgTGGATTCAAGAATACTACCACTAATGAAACTGACTGTTTCCGGTATCACAAAGTTTCACCGACCAAGTTGATAATTGCAGGATCAATCCTAggctctcttcttcttctgctaATAACTACCTCTGCAATTTATTTCATCTACAACTTCCACATATCGCGAAAAGAAAACCGAGCAATTGTTgaaaagtttttgaaagattatGAAGCTCTCAAGCCCACAAGATATTCATATGCTGAAATTAAGAGAATTACTAATCAGTTTAAGGAAAAGTTAGGACAAGGTGCCTATGGTGTTGTGTTCAAGGGCAAGATTTCAACCCAGTACTCAGTTGCTGTGAAAATCCTCACTATATCCCAAGGAAATGGTGAAGACTTCATCAATGAAGTCGGAACAATGGGTAGAATCCATCATGTCAACATTGTTCGCCTAATTGGCTTCTGTGCTGATGGATTCAGAAGAGCTCTTGTTTATGAGTTTTTACCAAATGGTTCCCTACAAAACTTCATAAACTCACCAGACAATAAACGAAACTTTCTTGAATGGATCTACAATTTTTTGGAAGAAAGAGAAGATGTAAGAATTCATATTGAAGATGAAGTGGATGCTAAAATTGCAAAGAAATTGGCAATAGTGGGATTGTGGTGCATCCAGTGGCATCCAGTGGATCGACCATCTATGGAAGCTGTGGTTCAAATGTTGGAAGGGGAAGGTGACAAATTAGAAGTACCTCCTAATCCTTTTGCTTCCCAAGGTGGAACAGGACAAAGAGCTACAGTACTGCCTGCAAGACACAAGGCTCAAGCCTTGGAAATAATCCATGAATTAGAGTGA 2454 0.3839 MAVNGISSSTQPLIPFFKGENYEFWSIKMRTLFMSQELWELVEHGYSASEADEQKLRENKKKDARALFFLQQAVSDDIFSRISAATTSKGAWQTLKTEFQGSSKVITVKLQSLRRTFEMLQMGNSETVQVFLSRASAIVSQMKAYGEKITDETVVLKLLRSLTPKFDHVVAAIEESKDFATYSFDDLMGSLQAHEDRLNKSSTRIEEKAFQVKGESSHTKSDGNVSNRSTSRGGYHARGRGGNRGRGGRSGEQRQVKNNSIKCYYCGKIGHKEADCWTKQRNEEKHANVAEEEESMLFMAHFFDKNFANAVWFLDSGCSNHMTGSKQLFKELDEKETSTVRLGDDKVIQVEGKEHVGWWNNSCPLPETTCGDLVIRFPFRIKGRQPQRCGYPGFALECTPTNHPLLELPYSVKLTVKHINYKSQTIDLYDPSSPCLYSKLENLNVSASPFQFTDDYYYAHTFFNCTPEDRGLTRASCLSSPAYQVYAIPHFSNMASYPISFCSIMFTIPSLPYDFFQEENMLHLMWSDPMCKHCESKGKICGFKNTTTNETDCFRYHKVSPTKLIIAGSILGSLLLLLITTSAIYFIYNFHISRKENRAIVEKFLKDYEALKPTRYSYAEIKRITNQFKEKLGQGAYGVVFKGKISTQYSVAVKILTISQGNGEDFINEVGTMGRIHHVNIVRLIGFCADGFRRALVYEFLPNGSLQNFINSPDNKRNFLEWIYNFLEEREDVRIHIEDEVDAKIAKKLAIVGLWCIQWHPVDRPSMEAVVQMLEGEGDKLEVPPNPFASQGGTGQRATVLPARHKAQALEIIHELE 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2767 817 SMART c2hcfinal6 262 278 IPR001878 GO:0003676|GO:0008270
Sto9g2767 817 MobiDBLite consensus disorder prediction 209 254 - -
Sto9g2767 817 MobiDBLite consensus disorder prediction 216 233 - -
Sto9g2767 817 Pfam gag-polypeptide of LTR copia-type 60 200 - -
Sto9g2767 817 ProSiteProfiles Protein kinase domain profile. 626 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2767 817 ProSiteProfiles Zinc finger CCHC-type profile. 262 276 IPR001878 GO:0003676|GO:0008270
Sto9g2767 817 PANTHER SERINE/THREONINE KINASE, PUTATIVE-RELATED 361 716 - -
Sto9g2767 817 PANTHER SERINE/THREONINE KINASE, PUTATIVE-RELATED 719 817 - -
Sto9g2767 817 Gene3D Transferase(Phosphotransferase) domain 1 698 782 - -
Sto9g2767 817 Gene3D - 237 290 - -
Sto9g2767 817 Gene3D Phosphorylase Kinase; domain 1 600 697 - -
Sto9g2767 817 ProSitePatterns Protein kinases ATP-binding region signature. 632 654 IPR017441 GO:0005524
Sto9g2767 817 SUPERFAMILY Protein kinase-like (PK-like) 613 722 IPR011009 -
Sto9g2767 817 Pfam Protein tyrosine and serine/threonine kinase 627 723 IPR001245 GO:0004672|GO:0006468
Sto9g2767 817 PANTHER RUST RESISTANCE KINASE LR10-RELATED 361 716 IPR045874 GO:0004672
Sto9g2767 817 PANTHER RUST RESISTANCE KINASE LR10-RELATED 719 817 IPR045874 GO:0004672
Sto9g2767 817 Pfam Wall-associated receptor kinase galacturonan-binding 367 430 IPR025287 GO:0030247
Sto9g2767 817 SUPERFAMILY Retrovirus zinc finger-like domains 245 286 IPR036875 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2767 Sto-Chr9 29426301 29436355 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2767 719 791 Receptor kinase-like Gene Family AT1G66910 51.316 1.24e-15 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Sto9g2767 Retrotran_gag_2 5.6e-26 CL0523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2767 - - jcu:105643764 409.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2767 9 29426301 29436355 Sto9g2767 9 29426301 29436355 ECH