Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2766 ATGGAATATAACTCGTGTATTGAAGGGCATAAACTTGATAAGCAGAGGTACTCAAGCATGAAGCTCGGGTCAATGCTCTATCTTCAGGGAGATGAAGGATCAAACAAATCAATTGTTTGGGATATGTTGCGGACAGGGACAGCTGTTATTCCACCTAATTTCAACATCCTCTGCAAACCCAACATGAAGCACCATCACAAaccaaatgaagaagaagattacaGGAGGAATATCCATATCATAACTCATAAGAGTCTCCGGCTCAACATATCCCACCACAATACTTGCAAGGCAAAACACGGTATTAGTGAGGCTTGTTCTAGCTCATGCGCAGGTCATAAAATCAGCGATCCTTTCCGGCTAAAACACGATCCACATCACTGCGGTGACGAGAGATACGAGCTAGCTTGCGAGGACAACCAATTGGTACAGTATTTACAAAATGGAAAATACAATGTTGTGAATATTGATTACAACAACTTCACAATCAGATTGAGGGATGCAAATATTATTCCGGACTTCAATTACTCTTCCCTCTCTCTCCCTCCTTATTCTTTATCTGACTACAACTTCACCCAAACCGATACATATAGCATCTTGAGCATCAAAAGAAGCGTGAACGACGGCGATATGCTAGTACAACCCCTGACTGAGCCTATCATACTTGTTAGGTGTGAGCATCCTGTGCATTCTTCTTTGTACGTTGACACTGCCCCTTGCATAACTCGTACTAATCCCTTCTATTTCTATGTCCTTGCTGGCACCGGTTACCTACccgatttagggttaaggggtgATTGTCGTATAGAGCTCCTCTATATGACTTCTTCGCCTCTCCACACCAACGCTTCCTGCACACATATCCACCGTTTGCTTCTCTATGGCTTTGACCTTTCGTGGTTCGACTTCAACTATACCTTCTGCCCCCTTACTACCTTCCATTCTCTTCATAATTTACTGGTGCCTCATTGTCGCACAACCTATATGCGACCTGCGTTTCTAAGTATAGGTCTATTTACTGCTGCCAAATCTATTGTTGTTGGAACTCCATTGGTCCTTGCGTTGTTGATCTATAAATGGCGACGGAGGCATTTATCTATGTATGACAATATCGAAGATTTTCTGCAAAGCGACAATAACATAATGCCCATAAGGTACTCTTACAAAGACATCAAGAAGATGACTCGAGGCTTCAAAATCAAACTTGGTAAAGGAGGCTATGGCTCTGTCTTCAGGGGACAACTACGAAGTGGCCGTATTGTAGCTATCAAAATGTTGGATAAGGCCAAAACAGGTGGTCAGGATTTCATCAACGAAGTTGCTACACTTGGCAGAATTCACCATGTTAACGTGGTGCACCTCATTGGTTATTGTGTGGAGGCATCAAAGCATGCTCTTATATATGAGTTCATGGAAAATGGGTCACTTGACAAATACATTCATTCTCAGCAGGATCATTCGTCCTTAAATATTGAAAAGCTATATGCCATTTCTCTTGGAATAGCTCGTGGTATTAAATATCTACATAACGGGTGTGACATGCAAATCTTGCATTTTGATATAAAGCCACACAACATCCTTCTTGATGATAACTTCAATCCAAAAGTTTCTGATTTTGGACTTGCTAGACTTTATTCTACGGATGACAGTATTGTGTCTCTAACAGCAGCAAGAGGAACTATAGGATACATGGCTCCTGAACTCTTCTACAAAAATGTGGGTGGCGTCTCCTACAAGGCCGATGTCTATAGCTTTGGAATGTTATTAATGGAGATGGCCAGCAGAAGGAAGAGTTTTAGTACATTAGCTGAGCACTCAAGCCAACATTACTTGcccttttgggtttatgatcaaTTAAACGAAGGGAAGGAAATTAACGTAATAAATGCGACAGAGGAGGAAATGAAATTGGCAAAGAAAATGATGATAGTGGCCTTGTGGTGCATACAGACAAAGCCTAGTGATCGTCCTTCAATGAATAGTGTTGTGGAGATGCTTGAAAGAGACAATGAAGACTTGCAATTACCTGGCGAGCCCTGTTTATATTCAAATGATCTTCCAGAAACGGAGGTTGAAGATGCTACATGCTCAACATGTCTATTATCCTCTGCTGCATCAGCAAGTGACTCCAAGTATTCAGTCGCTACTATTTTAGCTCAAGAGTCTAGAGGATGA 2175 0.4046 MEYNSCIEGHKLDKQRYSSMKLGSMLYLQGDEGSNKSIVWDMLRTGTAVIPPNFNILCKPNMKHHHKPNEEEDYRRNIHIITHKSLRLNISHHNTCKAKHGISEACSSSCAGHKISDPFRLKHDPHHCGDERYELACEDNQLVQYLQNGKYNVVNIDYNNFTIRLRDANIIPDFNYSSLSLPPYSLSDYNFTQTDTYSILSIKRSVNDGDMLVQPLTEPIILVRCEHPVHSSLYVDTAPCITRTNPFYFYVLAGTGYLPDLGLRGDCRIELLYMTSSPLHTNASCTHIHRLLLYGFDLSWFDFNYTFCPLTTFHSLHNLLVPHCRTTYMRPAFLSIGLFTAAKSIVVGTPLVLALLIYKWRRRHLSMYDNIEDFLQSDNNIMPIRYSYKDIKKMTRGFKIKLGKGGYGSVFRGQLRSGRIVAIKMLDKAKTGGQDFINEVATLGRIHHVNVVHLIGYCVEASKHALIYEFMENGSLDKYIHSQQDHSSLNIEKLYAISLGIARGIKYLHNGCDMQILHFDIKPHNILLDDNFNPKVSDFGLARLYSTDDSIVSLTAARGTIGYMAPELFYKNVGGVSYKADVYSFGMLLMEMASRRKSFSTLAEHSSQHYLPFWVYDQLNEGKEINVINATEEEMKLAKKMMIVALWCIQTKPSDRPSMNSVVEMLERDNEDLQLPGEPCLYSNDLPETEVEDATCSTCLLSSAASASDSKYSVATILAQESRG 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2766 724 ProSitePatterns Serine/Threonine protein kinases active-site signature. 516 528 IPR008271 GO:0004672|GO:0006468
Sto9g2766 724 Gene3D Phosphorylase Kinase; domain 1 363 470 - -
Sto9g2766 724 Gene3D Transferase(Phosphotransferase) domain 1 471 676 - -
Sto9g2766 724 ProSiteProfiles Protein kinase domain profile. 396 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2766 724 ProSitePatterns Protein kinases ATP-binding region signature. 402 424 IPR017441 GO:0005524
Sto9g2766 724 Pfam Protein tyrosine and serine/threonine kinase 400 666 IPR001245 GO:0004672|GO:0006468
Sto9g2766 724 Pfam Wall-associated receptor kinase galacturonan-binding 106 167 IPR025287 GO:0030247
Sto9g2766 724 PANTHER RUST RESISTANCE KINASE LR10-RELATED 90 302 IPR045874 GO:0004672
Sto9g2766 724 PANTHER RUST RESISTANCE KINASE LR10-RELATED 336 690 IPR045874 GO:0004672
Sto9g2766 724 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 90 302 - -
Sto9g2766 724 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 336 690 - -
Sto9g2766 724 SUPERFAMILY Protein kinase-like (PK-like) 376 667 IPR011009 -
Sto9g2766 724 SMART serkin_6 396 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2766 Sto-Chr9 29418105 29421465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2766 302 717 Receptor kinase-like Gene Family AT4G18250 42.529 3.07e-103 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Sto9g2766 PK_Tyr_Ser-Thr 1.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2766 - - aip:107607706 646.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2766 9 29418105 29421465 Sto9g2766 9 29418105 29421465 ECH