Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2761 ATGAACATGTGTTCCTCAGGTGTGGTGGTTTTTGTGATGATGATAATGGTATGCTACAATTACAAATTAGCTCGTGGTGATGATGAGGGGTGTTCTAGTTTGTGTGGGGGTCTTAACGTCACCCACCCTTTCCGCCTGAAAGAGTATGCAAGGGAGTGTGGCGACAGTAGGTATGAGCTATCTTGCGACGACACCCAATTGATACTGAATTTGGAATCTGCAAAATTCAAAGTTGAGTCCATTAATTACAGCAACTACACAATCCGTGTGAGGGATGCCAATGTTGTGGActtcaatttctcttccctccctctttcttctttaagCATTTACAACAACTTCTCCagatttgatccatatagctctCTGATATACCAGAATTACTACCCTGAGTACTCTATTCATATGATGATGGTATACTTTGGGTGTAATAAAATAGAAGGAGTGGTGAATTCGTCCAAGTACGTTGACGCCGCCCCTTGCATGGAAAAGATGGAAGGTTCATCGTTATGGTATTTGTATAATGATACAGAGGGCGCAAGTCTATGGGATTTGGGGTTAGAAGAGGGCTGTTCCATACAACTCATTTATTGGACATCGCGGCCTCTAAATGGAACCACTTATTCGTGCAAAGACATCCACAATATGCTTGTTTATGGCTTTGAGCTTTCTTGGTTGAACAGCTTCTGCCCCCACAATTCtgggaattattattattatgcctATCTCGATCACAACAATAACACTGTTTGTGGCAGCGCCGGGAACACTAGTGGGATTCGACTGATCTTGGAGGATATAGCGTATATTTTGAAGGggattattttccttttttggccAATACGGACCGTAGATTCGATTGACTATGGTGCTGCTCTACATATTGCTCTCAAATGTATTCCTGGGACTCCATTTGTCATTTGGTTGTTAATCTATAAATGGCGACGAAGGCATTTGTCTATGTATGACAACATCGAAGATTTTTTGCAAGCCGACAATAGCATCGTGCCAATAAGGTACTCTTACAAAGATATCAAGAAGATGACTCAAGCATTCAAAGTTAAATTGGGGAAAGGGGGTTACGGCTCTGTGTTTAGAGGACAACTTCAAAGTGGTCGTCTTGTAGCCGTCAAGATGTTGGATAAAGCCGAAGCCCAAGGTCAGGACTTTATCAATGAAGTTGCTACACTTGGAAGAATCCACCATGTTAATGTGGTGCACCTTGTTGGTTATTGCGTGGATGGCTCAAAACGTGCccttatatatgaatttatgaAAAATGGGTCTCTTGACAAATACATTCATTCTCAACAACATAATGATGATCATTCTTTGAGTTTTGATCAATTGTATGCTATTTCTCTTGGAGTAGCACGTGGTATTGAATATCTACATAAGGGATGCAACATTCAAATCCTGCACTTTGATATAAAGCCACACAACATTCTTCTTGATGACTGCTTCAATCCAAAGgaaagaaaggaaatcaacATTGAAAATGCAACAGAGGAAGAAACGAAGTTGGCAAGGAAAATGATGAAAGTGGGGTTGTGGTGCATACAGACAAATCCTAATGATCGTCCTTCAATGAATAGAGTAGTGGAGATGcttgaaggagaagaggaagacataGAAATGCCTCAGAAGCCTTACCTATTTCCACAAGATCTACCAACAATAAATGTTACAGATCACACAAGTTCAACAAGTCCACCCTCTGATCCATCAGGAAGTGATCCCAAGGACTCAGTTTCACTGTTAGCCCGAGAGGATGTTCGATCAATATAg 1788 0.3781 MNMCSSGVVVFVMMIMVCYNYKLARGDDEGCSSLCGGLNVTHPFRLKEYARECGDSRYELSCDDTQLILNLESAKFKVESINYSNYTIRVRDANVVDFNFSSLPLSSLSIYNNFSRFDPYSSLIYQNYYPEYSIHMMMVYFGCNKIEGVVNSSKYVDAAPCMEKMEGSSLWYLYNDTEGASLWDLGLEEGCSIQLIYWTSRPLNGTTYSCKDIHNMLVYGFELSWLNSFCPHNSGNYYYYAYLDHNNNTVCGSAGNTSGIRLILEDIAYILKGIIFLFWPIRTVDSIDYGAALHIALKCIPGTPFVIWLLIYKWRRRHLSMYDNIEDFLQADNSIVPIRYSYKDIKKMTQAFKVKLGKGGYGSVFRGQLQSGRLVAVKMLDKAEAQGQDFINEVATLGRIHHVNVVHLVGYCVDGSKRALIYEFMKNGSLDKYIHSQQHNDDHSLSFDQLYAISLGVARGIEYLHKGCNIQILHFDIKPHNILLDDCFNPKERKEINIENATEEETKLARKMMKVGLWCIQTNPNDRPSMNRVVEMLEGEEEDIEMPQKPYLFPQDLPTINVTDHTSSTSPPSDPSGSDPKDSVSLLAREDVRSI 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2761 595 Pfam Protein tyrosine and serine/threonine kinase 353 486 IPR001245 GO:0004672|GO:0006468
Sto9g2761 595 Gene3D Transferase(Phosphotransferase) domain 1 425 491 - -
Sto9g2761 595 Gene3D Phosphorylase Kinase; domain 1 328 424 - -
Sto9g2761 595 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 7 250 - -
Sto9g2761 595 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 497 558 - -
Sto9g2761 595 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 293 491 - -
Sto9g2761 595 SUPERFAMILY Protein kinase-like (PK-like) 333 491 IPR011009 -
Sto9g2761 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Sto9g2761 595 SMART serkin_6 350 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2761 595 Pfam Wall-associated receptor kinase galacturonan-binding 31 92 IPR025287 GO:0030247
Sto9g2761 595 PANTHER RUST RESISTANCE KINASE LR10-RELATED 7 250 IPR045874 GO:0004672
Sto9g2761 595 PANTHER RUST RESISTANCE KINASE LR10-RELATED 293 491 IPR045874 GO:0004672
Sto9g2761 595 PANTHER RUST RESISTANCE KINASE LR10-RELATED 497 558 IPR045874 GO:0004672
Sto9g2761 595 MobiDBLite consensus disorder prediction 547 595 - -
Sto9g2761 595 MobiDBLite consensus disorder prediction 559 580 - -
Sto9g2761 595 Gene3D Transferase(Phosphotransferase) domain 1 492 552 - -
Sto9g2761 595 ProSiteProfiles Protein kinase domain profile. 350 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2761 595 ProSitePatterns Protein kinases ATP-binding region signature. 356 378 IPR017441 GO:0005524
Sto9g2761 595 Coils Coil 491 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2761 Sto-Chr9 29387887 29393615 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2761 497 567 Receptor kinase-like Gene Family AT1G66910 48.611 7.16e-14 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Sto9g2761 PK_Tyr_Ser-Thr 3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2761 - - qsu:111983272 405.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2761 9 29387887 29393615 Sto9g2761 9 29387887 29393615 ECH