Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2760 TTGGTTTTGCTAGTCACTGCTGCTGCACTTCATTACGTCTACAACTCTCACAAATCATGGAAACAAAATCAAGCAATAATTGAAAAGTTTCTCAAAGATTACAGAGCTCTCAAGCCCACCAGATATTCTTATGCTGAAATTAAGAGAATCACCAATCAGTTTGGAAACAGGTTAGGACAAGGATCTTATGGTACTGTTTTCAAAGGAAATATTTCAACCCAATTCACAGTTGCTGTGAAAATCCTCACTAACTCCGAAGGAAATGGAGAAGAGTTTATTAATGAAGTTGGAACAATGGGTAGAATCCATCATGTTAACATTGTTCGCTTGATTGGTTTCTGTGCCGATGGCTTCAGAAGAGCTCTTGTTTATGAGTTCTTACCAAATGGTTCCCTACAAAATTTCATAAATTCACCCAACAATAGAGAGAAATTTCTTGGTTGGAACAAGCTGCAAGAAGTTGCTTTGGGCATAGCTAAAGGAATTGAGTATCTTCATCAAGGGTGTGATCAACGCATACTCCATTTTGACATCAAACCTCACAATGTTTTATTAGACCATGACTTTACACCAAAAATTTGTGATTTTGGGCTAGCCAAATTATGTTCCAAGGATCAAAGCATAGTCTCTATGACTACTGCTAGAGGAACTATGGGCTATATCGCACCAGAAGTCTTCTCTCGAAACTTTGGAAATGTGTCTCACAAAGCAGATGTTTATAGTTTTGGAATGCTACTGCTTGAAACAATAGGAGGGAGGAAGATCACAGAAGACACAAAAGAGAACATTAGCCACATTAACTACCCAGAATGGATCTATAACATTTTAGAAGAAAGGGAAGATGTAAGAATTCATATTGAAGACGAGAGGGATACTAGAATTGCAAAAAAATTGGCAACAGTGGGGCTGTGGTGCATCCAGTGGCATGCTGTGGATCGACCATCAATGCAAAGTGTGGTTCATATGTTGGAAGGAGGAGACAAATTACCTGTTCCTCCCAACCCTTTCGATTCAGAAGGTCCATCAACCAGAAAAACTGCAAATATGCCAGCAAGACACCTTATCCACGGTTTAGAAATAATCCGTGAAGTAGAGTGA 1098 0.3907 LVLLVTAAALHYVYNSHKSWKQNQAIIEKFLKDYRALKPTRYSYAEIKRITNQFGNRLGQGSYGTVFKGNISTQFTVAVKILTNSEGNGEEFINEVGTMGRIHHVNIVRLIGFCADGFRRALVYEFLPNGSLQNFINSPNNREKFLGWNKLQEVALGIAKGIEYLHQGCDQRILHFDIKPHNVLLDHDFTPKICDFGLAKLCSKDQSIVSMTTARGTMGYIAPEVFSRNFGNVSHKADVYSFGMLLLETIGGRKITEDTKENISHINYPEWIYNILEEREDVRIHIEDERDTRIAKKLATVGLWCIQWHAVDRPSMQSVVHMLEGGDKLPVPPNPFDSEGPSTRKTANMPARHLIHGLEIIREVE 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2760 365 PANTHER RECEPTOR-LIKE KINASE 2 363 - -
Sto9g2760 365 ProSiteProfiles Protein kinase domain profile. 52 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2760 365 SMART serkin_6 52 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2760 365 SUPERFAMILY Protein kinase-like (PK-like) 36 323 IPR011009 -
Sto9g2760 365 Pfam Protein kinase domain 55 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2760 365 PANTHER RUST RESISTANCE KINASE LR10-RELATED 2 363 IPR045874 GO:0004672
Sto9g2760 365 Gene3D Phosphorylase Kinase; domain 1 26 126 - -
Sto9g2760 365 ProSitePatterns Protein kinases ATP-binding region signature. 58 80 IPR017441 GO:0005524
Sto9g2760 365 Gene3D Transferase(Phosphotransferase) domain 1 127 328 - -
Sto9g2760 365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2760 Sto-Chr9 29385457 29386554 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2760 41 336 Receptor kinase-like Gene Family AT5G38280 53.795 7.96e-108 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Sto9g2760 Pkinase 2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2760 - - mtr:MTR_1g031540 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2760 9 29385457 29386554 Sto9g2760 9 29385457 29386554 ECH