Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2753 ATGTATGCAGACACTGGTCTTCTCTTCCCGTATTTCCAGAATTTCTCTCAGGAGCTTCAGCAACTCGATGAGTATTGCAAAACCCACAAGTCCAATGCTTCAATGTGGGGTTCGTCTTTTTGTGCCGCACTGAGGGAGATCAAAGAGATGGACCTTGCTCAGTCTTCTGCCATGCCGGAGTATGATTTGGCAGCAGAGGGAGATCTGTTCAAAGCTCCTGAACCTATTATTGAAGAACCAGTCATGGACTTGGATCCCATGACAGCAGCCATCTCTATGATATCTTGTGGAGAAGATGTTGTCTCCTCCCAGGGACTGAAGCCCACCGATATCGATGCTCTTCAGAACGAACAGCTTCTGAGCGAGGTATTCTACGAATGCAAAAAGGATCTGTTGGAAAAGGCTGCTATTGAGTTACCACTATCTGAGATTCTGGAAATCAAGGTCCCTCTTCTGAACACAGATGAAAACccaattgaagaaaataaaccGTTTCCCAGTACTATGCCATTACCGAAAAGTGTGAGCTCAGAATGCTTGAGCTCTATGGACTGGATGCAAGGAGCTGCAATGAAGCCTGCTTTTCTTGATTTCCCTGGAATTGATTTCAGTGCAGATTATGGCATGCGGAGGGCATTTAGTGAAGGAGATATTAAGGCTCTGGGAAATGGTAATATGCATGTTATCCAATCCCCTCTTGAGAGGCCCTCTCTTTTCAGTAACTGCACCAGCGAGGAACGGCGAGAAAAACTTTCCAGATATAGGAATAAGAAGACAAAGAGAAATTTTGGCCGGAAAATCAAGTATGCTTGCAGGAAGGCTCTTGCAGACAGCCAACCAAGGATTCGAGGAAGATTTGCAAAGACTGAAGAATGTGATGTGAGGAGGCAATGA 894 0.4452 MYADTGLLFPYFQNFSQELQQLDEYCKTHKSNASMWGSSFCAALREIKEMDLAQSSAMPEYDLAAEGDLFKAPEPIIEEPVMDLDPMTAAISMISCGEDVVSSQGLKPTDIDALQNEQLLSEVFYECKKDLLEKAAIELPLSEILEIKVPLLNTDENPIEENKPFPSTMPLPKSVSSECLSSMDWMQGAAMKPAFLDFPGIDFSADYGMRRAFSEGDIKALGNGNMHVIQSPLERPSLFSNCTSEERREKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEECDVRRQ 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2753 297 Pfam CCT motif 247 289 IPR010402 GO:0005515
Sto9g2753 297 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 40 295 - -
Sto9g2753 297 PANTHER CCT MOTIF FAMILY PROTEIN 40 295 - -
Sto9g2753 297 ProSiteProfiles CCT domain profile. 247 289 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2753 Sto-Chr9 29323043 29326081 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2753 222 291 C2C2-CO-like Transcription Factor Family AT5G57660 41.667 1.01e-09 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sto9g2753 CCT 8.1e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2753 - - gmx:100814332 442.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2753 9 29323043 29326081 Sto9g2753 9 29323043 29326081 ECH