Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2748 ATGGAGTTCGGAAGGATCGGACCCTCCGACCCGGGTGGCTCCTCCAGGCGTTCCGATGCTCCCATCATTGCTAGGCCCAACACTTCCTCCTCATTCTCCTCCCGTAACAAGAACAAGCTCATAATCTTGTCTATTCTCGCCGGCCTTTTAATCGTCGCTTCCGCAATCTCCGCCGTCCTCGTCGTCCGTGGCCGGGGCGGGGGTTCGGGCCCCAATGGGCCTGATATCCGGGGAAAGCCCACTCAAGCGATCTCTCGGACCTGCAGCAAAACCCAATTCCCCTCTCTCTGCGTCCAGTCACTCCTGGAATTCCCGGGTTCCACCACGGCGTCGGAGGAAGAACTCGTCCACATTTCCTTTAACATGACCCTGCAGCACCTCAGCAAAGCCCTCTATACCTCCTCCGGGATCTCCTACGTCCAGATGGATCCACGTGTACGATCCGCGTACGAGGACTGCCTTGAGCTCCTCGAGGACTCCGTGGACGCCCTCCTACGCTCCCTCTCCTCCGTCGGAGACGTCAAATTGGGCGGGTCCACGGAggatgtgatgacgtggctgaGCGCCGCGCTCACCAATCAGGACACGTGTACGGAGGGGTTCGAGGAGATGAACGGCGCCGTGAAGGATCAGATGAGGAATAATTTGAAGGACTTGGCGGAGCTGGTGAGCAATTGCCTCGCCATTTTCTCGTCCAGTGACACTAGTGGGGATTTCGGGGGAGTGCCCATACAGAACAGGAGAAGATTGATGGGAAAGGGAGACGATAATATTAATGTTGCGGATATCTCGGGAAATTTCCCGAAATGGATGAGCAGACGAGATAGGAGATTGTTGAGCTTGCCTATATCGGCGATACAAGCCGATATTGTGGTGTCCAAGGACGGGAATGGAACGTATAAGACAATCGCGGAGGCTATTAAGAAGGCGCCTGAGCATAGTAGCCGACGGTTCATCATTTACGTGGGAAGGAAGAAAACTAATTTGATGTTCATAGGAGACGGGAGGGGCAAGACGATCATCAGAGGTGACAAAAATGTTATGGATGGCTTGACCACGTTCCACACTGCTTCTTtcgCTGCTACCGGTGCCGGCTTCATTGCACGGGACATGACATTCGAGAACTACGCCGGTCCGAGCAAGCACCAGGCAGTGGCCCTCCGTGTCGGAGCGGACCACGCCGTGATCTACCGTTGTGACATCATCGGTTACCAAGACACATGTTATGTCCACTCCAACCGTCAGTTCTTCCGTGAATGTAACATTTATGGAACTGTGGACTTTATTTTCGGTAACGCTGCAGTGGTTTTTCAAAACTGCAGCCTCTACGCTCGCAAGCCCATGGACCAACAAAAGAACACAATCACGGCCCAAAACCGAAAAGACCCGAATCAGAACACGGGTATATCCATCCACAATTGTCGGATCGTTGCTGCCTCGGATCTGGAGCCGGTAAAGGGAAGCATCCCCACGTATCTTGGGCGTCCGTGGAAATTATACTCTAGAACAGTGTACATGTTATCCTACATGGGTGATCACATACATCCACGTGGATGGCTAGAGTGGAATTCAACATTTGCTTTAGACACATTGTACTATGGTGAGTACATGAATTCTGGGCCGGGCGCAGCTATTGGAGAGCGGGTCAAGTGGCCCGGATACCGGGTCATCACGTCCAACGTGGAGGCAAAGCGGTTCTCGGTGGCCGAATTCATATCCGGTTCGACATGGTTACCCTCAACTGGAGTGGCTTTCTTGGCTGGGCTATCCACTTGA 1776 0.5282 MEFGRIGPSDPGGSSRRSDAPIIARPNTSSSFSSRNKNKLIILSILAGLLIVASAISAVLVVRGRGGGSGPNGPDIRGKPTQAISRTCSKTQFPSLCVQSLLEFPGSTTASEEELVHISFNMTLQHLSKALYTSSGISYVQMDPRVRSAYEDCLELLEDSVDALLRSLSSVGDVKLGGSTEDVMTWLSAALTNQDTCTEGFEEMNGAVKDQMRNNLKDLAELVSNCLAIFSSSDTSGDFGGVPIQNRRRLMGKGDDNINVADISGNFPKWMSRRDRRLLSLPISAIQADIVVSKDGNGTYKTIAEAIKKAPEHSSRRFIIYVGRKKTNLMFIGDGRGKTIIRGDKNVMDGLTTFHTASFAATGAGFIARDMTFENYAGPSKHQAVALRVGADHAVIYRCDIIGYQDTCYVHSNRQFFRECNIYGTVDFIFGNAAVVFQNCSLYARKPMDQQKNTITAQNRKDPNQNTGISIHNCRIVAASDLEPVKGSIPTYLGRPWKLYSRTVYMLSYMGDHIHPRGWLEWNSTFALDTLYYGEYMNSGPGAAIGERVKWPGYRVITSNVEAKRFSVAEFISGSTWLPSTGVAFLAGLST 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2748 591 CDD PMEI-like_3 88 231 - -
Sto9g2748 591 TIGRFAM PME_inhib: pectinesterase inhibitor domain 79 230 IPR006501 GO:0004857
Sto9g2748 591 Gene3D Invertase/pectin methylesterase inhibitor family protein 80 232 IPR035513 -
Sto9g2748 591 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 82 231 IPR035513 -
Sto9g2748 591 PANTHER PECTINESTERASE 28 589 - -
Sto9g2748 591 MobiDBLite consensus disorder prediction 1 33 - -
Sto9g2748 591 Pfam Plant invertase/pectin methylesterase inhibitor 83 229 IPR006501 GO:0004857
Sto9g2748 591 SMART PMEI_2 79 229 IPR006501 GO:0004857
Sto9g2748 591 ProSitePatterns Pectinesterase signature 2. 422 431 IPR033131 -
Sto9g2748 591 SUPERFAMILY Pectin lyase-like 284 588 IPR011050 -
Sto9g2748 591 Gene3D - 283 589 IPR012334 -
Sto9g2748 591 PANTHER PECTINESTERASE 28 589 - -
Sto9g2748 591 Pfam Pectinesterase 289 574 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2748 Sto-Chr9 29279693 29282582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2748 1 590 Carbohydrate Esterase AT5G53370 63.802 0.0 790
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2748 - - gmx:106796002 857.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2748 9 29279693 29282582 Sto9g2748 9 29279693 29282582 ECH