Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2733 ATGGCTTTGCCAAGCCCACAAATCCAGAGATTCGTCATAAGCAAGCTCCATAGCCGCTCAACCTCCATTAATGGCAATCGTAGGAATAATAGCTTCACCACTACTAGCAGAGGCCGATGCTGCTCTGCCATAGCCATTGATACTCCTTCGTCTTTGACCGACGTGGCTGGTATCCGATGGGGATCCATAGCTTTGCAGGGTCTCCGTGAAGAGATGGAAGATGCTATTGTTCTTAGGCCTGGTGGCCTTGATCCCTTCTCTTTTGCTGCTGTCTTTGATGGTCATGGAGGATTTTCTTCCGTCCAATTCCTCAGTTCCAATTACAGGGATGAACTGTACAAGGAGTGTCTTACAGCTCTACAAGGAGGTTTACTATTGGCTAGAAAAGATTTCCAAGCCATTAAAGCGGCATTACAGGAAGCATTTGCCAATGCTGATGCAAGTTTGTTAAAACGgCTTGAAATGAGTGAGGAGGAGGATGAATCTGGAGCTACAGCAACAGCTGTGTTCATTGGAGATGACATGATGCTCATTTCACATATTGGCGATTCATCTGTGGTTCTAAGCAGATCTGGAAAAGCAGAAGTGCTGACTAGTCCTCACAGACCATATGGGAGTAACCAGGCCTCTcttcaagaaattaaaagagtCAGAGATGCAGgtggatggATTGTCAATGGTAGAATTTGTGGAGACATTGCTGTATCTCGCGCATTTGGGGACATACGATTCAAAACAAAGAAGAATGAGATGCTGAGGAAAGGGGTTGAGGAAGGCAGATGGTCAGAAAAGTTTATTTCTCGTGTACGGCTCAACAATGATTTGGTCATTGCATGCCCTGATATTTATCAAGTAGCTCTTGGCTCAGATGCAGAATTTGTAGTATTAGCATCCGATGGCCTATGGGATTACATGAGCAGCTCAGAAGCGGTttcttttgtgagggatcaACTTCGAAAGCATGGGAATATTCAGATAGCTTGTGAAGCTCTTGCACAAGCAGCTCTGGACCGACGCACACAGGATAATGTTAGCATCATAATTGCTGATTTAGGGCGAACAGACTGGCAGAACTTGCCGCTGCAGCAACAAAACGTAATATATGAGATGGTCCAAGCTATAGCCACCATTGGCATTGTGGCGCTCGGAATTTGGTTTTCTTCCCAGATTTCGTTGTGA 1179 0.4377 MALPSPQIQRFVISKLHSRSTSINGNRRNNSFTTTSRGRCCSAIAIDTPSSLTDVAGIRWGSIALQGLREEMEDAIVLRPGGLDPFSFAAVFDGHGGFSSVQFLSSNYRDELYKECLTALQGGLLLARKDFQAIKAALQEAFANADASLLKRLEMSEEEDESGATATAVFIGDDMMLISHIGDSSVVLSRSGKAEVLTSPHRPYGSNQASLQEIKRVRDAGGWIVNGRICGDIAVSRAFGDIRFKTKKNEMLRKGVEEGRWSEKFISRVRLNNDLVIACPDIYQVALGSDAEFVVLASDGLWDYMSSSEAVSFVRDQLRKHGNIQIACEALAQAALDRRTQDNVSIIIADLGRTDWQNLPLQQQNVIYEMVQAIATIGIVALGIWFSSQISL 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2733 392 Gene3D - 58 357 IPR036457 -
Sto9g2733 392 PANTHER PROTEIN PHOSPHATASE 2C 57 7 388 - -
Sto9g2733 392 SUPERFAMILY PP2C-like 56 352 IPR036457 -
Sto9g2733 392 Pfam Protein phosphatase 2C 61 344 IPR001932 -
Sto9g2733 392 CDD PP2Cc 58 351 IPR001932 -
Sto9g2733 392 ProSiteProfiles PPM-type phosphatase domain profile. 59 351 IPR001932 -
Sto9g2733 392 ProSitePatterns PPM-type phosphatase domain signature. 88 96 IPR000222 GO:0043169
Sto9g2733 392 PANTHER PROTEIN PHOSPHATASE 2C 7 388 IPR015655 GO:0004722|GO:0006470
Sto9g2733 392 SMART PP2C_4 49 349 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2733 Sto-Chr9 29179617 29182731 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2733 1 328 PP2C-type Phosphatase Gene Family AT4G27800 62.424 4.23e-143 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2733 K04457 - gmx:100784071 619.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2733 9 29179617 29182731 Sto9g2733 9 29179617 29182731 ECH