Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2713 ATGATTTGGGCTGGCTCCATCCCCTCAATTTTCATCctccttcttctcttccttCTAATCCTTCGTTTTCTCCGCAAAACTTCCGTCTTGTACATTCTTCGAAGATGGTGGTTTACCTTTGAAAACCACCTCCATGTTCATCAATCCTTCAAAATCCCACTCTACAATGAGCATTTCCAGGAAAATCAACTATACCAGAAAATCCTCACGTACCTTAATTCATTACCTTCGGTAGAAGACTCTGATATCACAAACCTTTTTTCTGGTTCCAAACCAAGTGAGATTTTCCTTCACCTCGATGCCAACCAGACAGTGCACGACACTTTCCTCAGCGCCAGAGTTTCCTGGACGAAGGAGAAATCCCAGCGAGACGGGAGGAATTCAGCACTGGTACTCAGAATCAAGAAGAAAGACAAACGCAGAATTTTCCGTCAGTATTTCCAGCACATCCTCACGGTGGCGGATGACATCgaacaaaagagaaaagagattaAGTTGTACTTGAACTCGGGAAGTAGTGACGATACCTCACGGTGGCGGTCGGTCCCGTTCACCCACCCGGCGAGCTTCGACACGGTGGTGATGGACGCAGAGCTGAAAAACAAGGTGAAATCCGATCTCGAACAGTTTCTCAAGTCGAAGCAGTACTACCACAGGCTAGGGCGTGTTTGGAAACGGAGCTACCTTCTCTACGGTGCGTCGGGTACGGGGAAATCCAGTTTCATCGCAGCGATGGCGAGGTCCCTTTGTTACGACGTGTACGACATCGATATCTCGAAAGTTTCTGACGACTCCGATTTGAAGACGCTGTTGCTGCAAACCACGAGTAGGTCGGTGATCGTGATGGAAGACCTTGATAGATTCGCGGGAGGGAAATCATCAACGGGCGTGAGCTTATCAGGTGTGTTGAACTTCATGGACGGGATTATATCGTGCTATGGGGAAGAGCGCGTGATGGTTTTCACCGTGAACGAGAAAGATCAGATTGATGAAGCGGTGATGAGGCCAGGGAGGATTGACGTTCACATACACTTCCCCTTGTGTGATTTCTCGACCTTCAAGGTTTTAGCTAGTAGTTATTTGGGGGTGAAGGATCACAAGCTGTTTCCTCAGGTGGAAGAGGGCTTTCAGGCCGGGGCCAGGATGAGCCCGGCCGAGATAGGAGAGATTATGATCTCGAACCGGAACTCACCCAGCCGGGCATTAAAAACCGTCATCACGGCTTTGCAGATGAATGGAATTGGAAGGGATGAGAGGAGGGGACAGAGGTTGAGCAGCAGTGGGTCGGGTCGGTACAGTGGAGAGTTGGGTCAAGCCGGTGGAATTGTATGTCAAGAAAGCGTTCACACGATGCGGAACTTGTATGGGCTTTTGCGTTTGGGAAGTAGGAGAAAAGAGGAGTCTATGGATTCTGGGCCCATAGAGAAAGAAGGCCCAAGGATCCAAGCATAA 1452 0.4814 MIWAGSIPSIFILLLLFLLILRFLRKTSVLYILRRWWFTFENHLHVHQSFKIPLYNEHFQENQLYQKILTYLNSLPSVEDSDITNLFSGSKPSEIFLHLDANQTVHDTFLSARVSWTKEKSQRDGRNSALVLRIKKKDKRRIFRQYFQHILTVADDIEQKRKEIKLYLNSGSSDDTSRWRSVPFTHPASFDTVVMDAELKNKVKSDLEQFLKSKQYYHRLGRVWKRSYLLYGASGTGKSSFIAAMARSLCYDVYDIDISKVSDDSDLKTLLLQTTSRSVIVMEDLDRFAGGKSSTGVSLSGVLNFMDGIISCYGEERVMVFTVNEKDQIDEAVMRPGRIDVHIHFPLCDFSTFKVLASSYLGVKDHKLFPQVEEGFQAGARMSPAEIGEIMISNRNSPSRALKTVITALQMNGIGRDERRGQRLSSSGSGRYSGELGQAGGIVCQESVHTMRNLYGLLRLGSRRKEESMDSGPIEKEGPRIQA 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2713 483 Pfam ATPase family associated with various cellular activities (AAA) 229 347 IPR003959 GO:0005524|GO:0016887
Sto9g2713 483 SMART AAA_5 224 349 IPR003593 -
Sto9g2713 483 PANTHER BNAANNG18710D PROTEIN 13 431 - -
Sto9g2713 483 CDD AAA 225 347 - -
Sto9g2713 483 Pfam Domain associated at C-terminal with AAA 32 117 IPR025753 -
Sto9g2713 483 Gene3D - 179 347 IPR027417 -
Sto9g2713 483 PANTHER BCS1 AAA-TYPE ATPASE 13 431 - -
Sto9g2713 483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 135 408 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2713 Sto-Chr9 29068065 29069516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2713 220 345 Calmodulin-binding Proteins AT3G56690 30.000 1.17e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2713 - K08900 zju:107414928 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2713 9 29068065 29069516 Sto5g1320 5 9018296 9019689 ECH
Sto9g2713 9 29068065 29069516 Sto9g2713 9 29068065 29069516 ECH