Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2699 ATGATCAACACCAACAATCATCACCAGAAACACCACCTCATGAATTTTCATGTGCTCAAGCCTCACCTCCATTTTCACTTGTTTCATTTTCATCATCACAAGGATGTGAAGGGGAAGGGCAATAATATTCCGAAAGGGTGTTTGGCCATATTGGTGGGCCAAGAAGGAGAAGAGCAAGAGAGGTTTGTGATCCCTGTGGTATACTTCAACCACCCTCTCTTCATTCACTTGCTTAAGCAAGCTGAGGAAGAATACGGGTTCGATCACAAAGGTCCCATCGCCATTCCTTGCCACGTCGACCACTTTCGTACCGTCCAAGGCTTGATTGATAAGGACAActctcatcatcaccatcatcatgcTTGGACGACAGGACAGGACAGAGTTGAGCCTGTGAAGGGCACAGTTGGGATTTGA 417 0.4388 MINTNNHHQKHHLMNFHVLKPHLHFHLFHFHHHKDVKGKGNNIPKGCLAILVGQEGEEQERFVIPVVYFNHPLFIHLLKQAEEEYGFDHKGPIAIPCHVDHFRTVQGLIDKDNSHHHHHHAWTTGQDRVEPVKGTVGI 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2699 138 Pfam Auxin responsive protein 37 105 IPR003676 GO:0009733
Sto9g2699 138 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 15 121 - -
Sto9g2699 138 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 15 121 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2699 Sto-Chr9 28997891 28998637 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2699 42 130 Calmodulin-binding Proteins AT3G43120 42.697 2.44e-17 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2699 K14488 - gmx:100793034 158.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2699 9 28997891 28998637 Sto9g2699 9 28997891 28998637 ECH