Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2698 ATGGGTCATTGCTGCAGCAAAAACCTTTCTGCCGTCGACAATGAAACCGCCGCCCGCAAACCTCCTCATTCCGCCGCATCGCCACCGCCTTCTGCTGATTCAGTCTCTGGAGCCAGCGATGTCACCCCTGGCCGCCATACTCCCGCCACCAACTCCTTCTCCACTAGTCCCTTTCCCAGTCCTCTCCCGCCTGGAGTGGCGCCGTCTCCGGCTAAAACTCCCGGAAGGAAATTTCGATGGCCACTGCCGCCTCCCTCGCCGGCGAAGCCCATCATGGCGGCCATAATGAGAAGGCAGGGGAAGCCTCAGCCGAAGGAGGGGCCCATACCGGAGGAGCAAGGCGAAAGTAAAGAGAGTGAGAGGCAGCTGGATAAGAGTTTTGGATATTCTAAGAACATTGCGGCTAAGTATGAGTTGGGGAAAGAAGTAGGTCGAGGGCATTTTGGTCATACTTGCTACGCCAAAGCTAAGAAAGGAGAGCTAAGGGGGCAGTCAGTAGCTGTCAAAGTCATATCCAAAGCTAAGATGACAACAGCCATAGCAATTGAAGATGTACGGAGAGAGGTGAAAATGCTGAAAGCCTTATCTGGACATAAGAATTTGGTCAAGTTTCTTGATGCATTCGAGGATTCCCAGAATGTTTACATAGTGATGGAACTGTGTGAGGGTGGAGAACTACTTGACAGAATTCTCTCAAGAGGTGGAAGATACACAGAAGAAGATGCTAAAGCTGTCCTTTTACAAATTCTAAATGTAGTTGCCTTTTGTCATCTTCAAGGCGTTGTTCATCGTGATCTAAAACCAGAGAATTTTCTATTTGTCTCGAAAGATGACGACGCTCAAATGAAGGTTATTGACTTTGGTCTTTCTGACTTTGTTAGGCCAGATCAACGGCTGAATGATATTGTGGGCAGTGCCTACTATGTCGCGCCTGAAGTGCTCCATAGATCCTACAGCGTTGAAGCTGACTTATGGAGCATCGGTGTTATAACATACATACTGCTATGTGGAAGCAGACCATTCTGGGCGCGCACTGAATCGGGAATCTTCCGGTCTGTTCTAAGAGCTAATCCTAACTTTGACGATTCGCCTTGGCCAGTGGTGTCTCCAGAAGCTAAAGACTTCGTAAAGAGACTTTTGAACAAGGACCACAGGAAAAGGATGACTGCTGCTCAAGCACTAACTCACCCATGGTTGAGAAATGAAAAACAAGATATTCCTTTAGACGTTTTTATCTACAAGCAAGTCAAGTCATACGTGCATGCCACACCTTTGAAACGAGCAGCACTCAAGgcTCTCTCAAAAGCATTGACAGAAGATGAGCTTATCTACCTTAAAGCACAGTTTAGCCTCTTGGAACCAAAAAACGGATACGTCTCCCTTGACAATTTTAGAGCGGCTCTCATGAAAAATGCAACTGATACTATGAAGGAATCAAAAGTCCCCGACATTTTAAATATGATGGATTCACTTGCCTACCAAAAACTGGAGTTCGAAGAGTTTTGTGCTGCTGCAATCAGTGTATACCAGCTCGAGGTTCACGAAGAATGGGAAACAATTGCGAAAACAGCTTTTGAGTATTTCGAGCAAGCAGGAAACGGAGTCATCTCAGTTGAAGAGTTGGCACAGGAAATGAATCTGGGTGCTTCATCGCACACTGCACTAGTCAATTGGATCCGACAATCGGATGGAAAACTCAGCTTCGTAGGATATACCAAGTTTTTGCATGGTGTCACAATCCGTAGTTCAAATGCAAGACAGCGACCGCGACAAAATCTTAGCTTAACTTCAGTGATTAAGTTTACATTTGACTTAAGATCCGTTAGAGGAAATAATGTGCTTACAAATGTTTATGATTACATTGCAATTTGGTCCGAAAAAGAAGAGTTGAGCAAAAAAAGGGCTATGCCGTGA 1914 0.4566 MGHCCSKNLSAVDNETAARKPPHSAASPPPSADSVSGASDVTPGRHTPATNSFSTSPFPSPLPPGVAPSPAKTPGRKFRWPLPPPSPAKPIMAAIMRRQGKPQPKEGPIPEEQGESKESERQLDKSFGYSKNIAAKYELGKEVGRGHFGHTCYAKAKKGELRGQSVAVKVISKAKMTTAIAIEDVRREVKMLKALSGHKNLVKFLDAFEDSQNVYIVMELCEGGELLDRILSRGGRYTEEDAKAVLLQILNVVAFCHLQGVVHRDLKPENFLFVSKDDDAQMKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSYSVEADLWSIGVITYILLCGSRPFWARTESGIFRSVLRANPNFDDSPWPVVSPEAKDFVKRLLNKDHRKRMTAAQALTHPWLRNEKQDIPLDVFIYKQVKSYVHATPLKRAALKALSKALTEDELIYLKAQFSLLEPKNGYVSLDNFRAALMKNATDTMKESKVPDILNMMDSLAYQKLEFEEFCAAAISVYQLEVHEEWETIAKTAFEYFEQAGNGVISVEELAQEMNLGASSHTALVNWIRQSDGKLSFVGYTKFLHGVTIRSSNARQRPRQNLSLTSVIKFTFDLRSVRGNNVLTNVYDYIAIWSEKEELSKKRAMP 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2698 637 Gene3D Transferase(Phosphotransferase) domain 1 226 415 - -
Sto9g2698 637 Pfam Protein kinase domain 137 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2698 637 SUPERFAMILY Protein kinase-like (PK-like) 136 422 IPR011009 -
Sto9g2698 637 MobiDBLite consensus disorder prediction 1 125 - -
Sto9g2698 637 Gene3D Phosphorylase Kinase; domain 1 130 225 - -
Sto9g2698 637 SMART serkin_6 137 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2698 637 MobiDBLite consensus disorder prediction 104 125 - -
Sto9g2698 637 MobiDBLite consensus disorder prediction 29 56 - -
Sto9g2698 637 CDD STKc_CAMK 136 398 - -
Sto9g2698 637 PANTHER CDPK-RELATED KINASE 3-LIKE ISOFORM X1 40 582 - -
Sto9g2698 637 ProSitePatterns Protein kinases ATP-binding region signature. 143 169 IPR017441 GO:0005524
Sto9g2698 637 ProSiteProfiles Protein kinase domain profile. 137 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g2698 637 SUPERFAMILY EF-hand 432 577 IPR011992 -
Sto9g2698 637 Gene3D - 438 506 - -
Sto9g2698 637 Gene3D - 416 565 - -
Sto9g2698 637 PANTHER SERINE/THREONINE-PROTEIN KINASE 40 582 - -
Sto9g2698 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 261 273 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2698 Sto-Chr9 28992402 28996518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2698 1 585 EF-hand Containing Proteins AT3G50530 57.911 0.0 717
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sto9g2698 Pkinase 2.2e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2698 - - var:108331904 917.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2698 9 28992402 28996518 Sto5g1338 5 9145316 9152818 ECH
Sto9g2698 9 28992402 28996518 Sto9g2698 9 28992402 28996518 ECH