Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2695 ATGGGTGAATTTAGCGTTTCACACAAGGAAGCTAGTAAGAGAAATAGCAGCACTAGCTTGGGTGTGAAGGTGCAGAAGCAGATCCTTGAAGCATTCCCTAGTGATAGCGAGACCATGATGATGATGGTTCCTCCTGCTCCTCATAATCATCACCATCCTCCACTGTCTCCCTCTGATGCTCTCACTTCTTCCACCACTTTTATGTCTACGCCTAATCATACAGTTACAAACCATTTTGTTAATGGTGCTTCTTCTGCTTTTGGTGCTGCACTTGTAAGACCCTCGCAGCCTTTTCACATTTCCACCTCAACCCCCTTCAAATCCTCAGGGGGAATGATGGCGGCTTCATTGGGGTATCCTTTCACAAATGCACAATGGAAGGAGCTTGAAAGACAAGCTATGATATACAAGTACATGATGGCATCTATACCTGTTCCTCCTCATCTCCTTATTCCCATGGCCGCTTCTCGCTCTCCCTTGGATAGTGGTTCGAATCTAAGGTTTTCAAGCAGTAATGATGCAGAGCCAGGAAGGTGCAGGAGAACGGACGGTAAAAAATGGAGATGCTCAAGAGACGTAGCGCCTAACCACAAGTATTGTGAGCGTCATATGCACAGAGGCCGTCCCCGTTCAAGAAAGCCTGTGGAAGTTGTTCAATCCAAtagcaccaccaccaccaccaccaacaataCTGCTAATAATAAGCAAATCAAGAGGGCTCGCCATGATTATCCTGTTTTTCCTGCTCCTGCTGTTACAGCCACTATTTCTAACTCCACACTCAGTAATTATggatcttcttcatcatctcaGTTTCTTGCGTCTACCACTACCACTCAGCCTCACCCACACTTTGGGTCTTCCCTTGGTGTCAAACCTCCACATTTTGACTTCCTTCCCTCTGTTTCATCAATTAAGGAACCCAGAGGATTGGAGTGGGTGCTGAAAGGAGACCCTATTTCCATGGCTGCTTCTGATCCAGAATGGCATCCCCTGATGCAGAACAGAGCTGGATTGAACAACAACGTGTCAAATTACAGAGACACTCTGTATATGAATGCGTACGAGGGTTACAGTTCGGGACTAGAGCAACACAACAAAAGCTCTCCTCTGTGGCCCAATGCTGTTGGTGTAAAACAAAGGGGTTTCATTGATGCTTGGTGTAATGCAGAAACAGAGGAAACCAACGCCAACAAGAAGCACTATGTAGCATCATCAAATGCCAAGTTACCACTTCCTTCTCTAGATCTATCAATGGGTGGTACTTTGGATGAAAACATGGGTAGTGTCCATATGGGTTTGGGCCCAATGGATGCTCCTGCACCATGGGTTGCTTCTTCAACACTTGGGGGCCCACTAGCTGAGGTATTGAGGCCCACCACGACGGGCAATGAAACAGGGTCCAATAACAATTCGAATGCATCGTCTCCGATGAGTCCGATGGTAACAGTGGTGGCATCTCCATCACCATCAGGGGTATTGCAGAAGACACTTGCTTCATTGTCTGATAGCAGTACTAGTAGCAGTAGCAGCCCAAGGGTGGCTTCTTCAACTTCAAGGGCCAATTCTGAAATGGCCTCTCTCTGCTTTAATCACACCAAATTACCATCTTCCTAA 1617 0.4527 MGEFSVSHKEASKRNSSTSLGVKVQKQILEAFPSDSETMMMMVPPAPHNHHHPPLSPSDALTSSTTFMSTPNHTVTNHFVNGASSAFGAALVRPSQPFHISTSTPFKSSGGMMAASLGYPFTNAQWKELERQAMIYKYMMASIPVPPHLLIPMAASRSPLDSGSNLRFSSSNDAEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKPVEVVQSNSTTTTTTNNTANNKQIKRARHDYPVFPAPAVTATISNSTLSNYGSSSSSQFLASTTTTQPHPHFGSSLGVKPPHFDFLPSVSSIKEPRGLEWVLKGDPISMAASDPEWHPLMQNRAGLNNNVSNYRDTLYMNAYEGYSSGLEQHNKSSPLWPNAVGVKQRGFIDAWCNAETEETNANKKHYVASSNAKLPLPSLDLSMGGTLDENMGSVHMGLGPMDAPAPWVASSTLGGPLAEVLRPTTTGNETGSNNNSNASSPMSPMVTVVASPSPSGVLQKTLASLSDSSTSSSSSPRVASSTSRANSEMASLCFNHTKLPSS 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2695 538 MobiDBLite consensus disorder prediction 215 230 - -
Sto9g2695 538 Pfam WRC 174 216 IPR014977 -
Sto9g2695 538 Pfam QLQ 120 152 IPR014978 GO:0005524|GO:0005634|GO:0006355
Sto9g2695 538 ProSiteProfiles WRC domain profile. 173 217 IPR014977 -
Sto9g2695 538 ProSiteProfiles QLQ domain profile. 120 155 IPR014978 GO:0005524|GO:0005634|GO:0006355
Sto9g2695 538 MobiDBLite consensus disorder prediction 161 183 - -
Sto9g2695 538 SMART QLQ_2 119 155 IPR014978 GO:0005524|GO:0005634|GO:0006355
Sto9g2695 538 MobiDBLite consensus disorder prediction 459 538 - -
Sto9g2695 538 MobiDBLite consensus disorder prediction 454 538 - -
Sto9g2695 538 PANTHER GROWTH-REGULATING FACTOR 7 69 515 - -
Sto9g2695 538 PANTHER - 69 515 IPR031137 GO:0005634|GO:0006351|GO:0032502
Sto9g2695 538 MobiDBLite consensus disorder prediction 205 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2695 Sto-Chr9 28970651 28973165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2695 339 506 GRF Transcription Factor Family AT5G53660 32.124 1.18e-10 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Sto9g2695 WRC 9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2695 - - gmx:100803096 422.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2695 9 28970651 28973165 Sto5g1342 5 9183288 9185475 ECH
Sto9g2695 9 28970651 28973165 Sto9g2695 9 28970651 28973165 ECH