Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2642 ATGGAGAGTCTGAAAACTGCAATTCCAGAAAGGCTGAGGCGAATGATCGGAGAGAGCACAACCGATGATCTTCCCGTCACATGTTCTTCTCTTCACCACTTCTTTCTTCATTTCGAGCCCTTTCACCAATTGGTAAGCGACTTGGCCGACCCAAAAAATGCTCTCTGTGGCAAGAGTGAATCCGCTGCTTTGGAATCCAAGCAGCTTGGCAATCAATACTTCTTGAAAGGAGATTATATGAAGGCTTTAAATTGCTATACGAAGGCATTGCGAGTGGCTCCTTTGGAGGCTAGTGACTTGGAGAAGAATCTGGTTGCAACATTATATATTAATCGAGCTACCGTTTTGCATAAATTGGATCTTTCAATAGAGTGTTTGCGAGACTGCACTCGAGCTCTTCAGATGTGTCCAAGCTATGCAAAGGCATGGTACAGGAGAGGTAAGGCGAATGCTTCACTGGGAAATAATAAAGATGCAATCTGTGATCTAAATGTGGCTAAGAGCATGGAATCATCATTGGGTGGGAAGAAGCAAATAGAAAGtgaactaaaaaatattttagatcaATGCGAGAGGACAAGTTCAGTAGTTCAGCACAAGAAGAATAGCTTGGATACAATAGGTGAGATGCCCCAAATAAAGCTACAGTTGGTCACCATGCCCGATAAAGGACGGGGTATGGTATCTACGTGTGATATTTCACCATCTTCTTTAGTTCATCGTGAAGAACCTTATGCTATGATAATATTAAAGCAATGCCGGGAAACTCATTGCCATTACTGCTTGAATGACCTTCCTGCTGACAGTGTTCCTTGTAGATCATGTTCAATACCACAGTACTGCTCTCAACAATGCCAGATACAGGCGGGTGGACAAGTGCCCAAGATTTACCCTGACGACCATGGCCTTCTTAAAAATCTACCCAGTGATCTTGGAAAGTATGTTGCAGAAATTATATTAGGCAATGATTTTGAAATTGAGGATATTCCTGAACATAAACATGAATGTCAAGGTGTACATTGGTCTGCAGTATTACCATCAGAGATAGTTTTGGCTGGCCGAGTACTAGCGAAGTTTTTGCAGAAAAATGCATGTGAAGATATTACTAACTTCGTGAAAAGCCTGGAACTTTCTCATTGTTATACACAACTGCCATCTGATAGCAAATTGGAATTACATATATATGCCATCGTATTGCTATATTGTCTGCAACACTCTGATGGTTCTGTGTTTTCCATGGATGGCGTCTCTGTGTCACAGgttatcataattttttctcaaattaAAGTGAATTGCATGACTGTTGTTCGAATGAGATCAATAGATGCTCATGGGCTACAAGATCAGTTTGGAGACTCTCCATCTAGCACATATTTAACGAGTAATGTGGAACAGGTCCGAGTGGGTAAAGCTATTTACAAATATGGCAGTTTGTTCAACCATTCTTGCCAACCAAACATTCATGCATATTTCCTTTCCCGTACTCTGTGTATACGGACAACAAAAGTTGTAGCAGCTGGGTGTCAGCTGGAATTGTCCTATGGTCCACAGGTTGGGCTGTGGGAATGTAAAGATCGCCATACCTTTCTGAAAGATGAGTACGCATTTCAATGTCAGTGTAGTGGTTGTTCGGAATTCAATCTGTCtgacattgtcctcaatgcttttcACTGTGTCAATCTAAATTGTTCTGGCACAGTCTTGGAAAGCAGTGTAGTTGACCGGGAAAAGCTGAAAATCAAGCACTTCTCAGGTGCTGACCAAGTTGACAAGAGTGATGACATTTATCAAGTCTGTGTTCGTTTATCCAACCAAAATGGTGGTTCCATTCATATTCAACCTGGATGCTGTTTGAAATGTGGTTCTTACCGCGATTTAGAATCTACACGCGCTGTAATTGACAAAGCTTGGATATGCATCAAAAGATTGCAGGATTCAATAATATCAAAAGAAATTTCAAATACTACTATTTCAGATGCTTTAGAATCTCTGTGTTTGCTGAGGTCAAATTTGCATGCTTACAACAAGCGTATTGCAGAGGCAGAGGACAGCCTTGCTCAGGCCTTTTGTATAGCGGGAAAGTTACAATTAGCAATGGACCATAGTAAAGCATCTTTGCTGATTCTGGAAAAGCTATATGATCCTGATGATATTGTCATTGCTCATGAAATTGTGAAGCTTTGTTCCATTCAAATATCCATGGGTGATAAAACTGCTCTGGACAGCATAAGTCGAATATGTGATATTTTCTCACGTTATTATGGACCTCATGCACACGTGGTATTCCCATATCTTCAGTACCTTAGGAAAGAAGCTGAGAATTTTTTAGTAAAGGCCTGA 2340 0.3991 MESLKTAIPERLRRMIGESTTDDLPVTCSSLHHFFLHFEPFHQLVSDLADPKNALCGKSESAALESKQLGNQYFLKGDYMKALNCYTKALRVAPLEASDLEKNLVATLYINRATVLHKLDLSIECLRDCTRALQMCPSYAKAWYRRGKANASLGNNKDAICDLNVAKSMESSLGGKKQIESELKNILDQCERTSSVVQHKKNSLDTIGEMPQIKLQLVTMPDKGRGMVSTCDISPSSLVHREEPYAMIILKQCRETHCHYCLNDLPADSVPCRSCSIPQYCSQQCQIQAGGQVPKIYPDDHGLLKNLPSDLGKYVAEIILGNDFEIEDIPEHKHECQGVHWSAVLPSEIVLAGRVLAKFLQKNACEDITNFVKSLELSHCYTQLPSDSKLELHIYAIVLLYCLQHSDGSVFSMDGVSVSQVIIIFSQIKVNCMTVVRMRSIDAHGLQDQFGDSPSSTYLTSNVEQVRVGKAIYKYGSLFNHSCQPNIHAYFLSRTLCIRTTKVVAAGCQLELSYGPQVGLWECKDRHTFLKDEYAFQCQCSGCSEFNLSDIVLNAFHCVNLNCSGTVLESSVVDREKLKIKHFSGADQVDKSDDIYQVCVRLSNQNGGSIHIQPGCCLKCGSYRDLESTRAVIDKAWICIKRLQDSIISKEISNTTISDALESLCLLRSNLHAYNKRIAEAEDSLAQAFCIAGKLQLAMDHSKASLLILEKLYDPDDIVIAHEIVKLCSIQISMGDKTALDSISRICDIFSRYYGPHAHVVFPYLQYLRKEAENFLVKA 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2642 779 Gene3D Tetratricopeptide repeat domain 520 774 IPR011990 GO:0005515
Sto9g2642 779 ProSiteProfiles TPR repeat profile. 63 96 IPR019734 GO:0005515
Sto9g2642 779 SUPERFAMILY SET domain 216 541 IPR046341 -
Sto9g2642 779 Gene3D Tetratricopeptide repeat domain 38 203 IPR011990 GO:0005515
Sto9g2642 779 ProSiteProfiles SET domain profile. 213 515 IPR001214 GO:0005515
Sto9g2642 779 SMART tpr_5 140 173 IPR019734 GO:0005515
Sto9g2642 779 SMART tpr_5 679 712 IPR019734 GO:0005515
Sto9g2642 779 SMART tpr_5 63 96 IPR019734 GO:0005515
Sto9g2642 779 SMART tpr_5 106 139 IPR019734 GO:0005515
Sto9g2642 779 Pfam SET domain 224 515 IPR001214 GO:0005515
Sto9g2642 779 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 772 - -
Sto9g2642 779 SUPERFAMILY TPR-like 64 703 IPR011990 GO:0005515
Sto9g2642 779 Gene3D SET domain 414 514 IPR046341 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sto9g2642 SET 3.9e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2642 K24634 - gmx:100794609 1127.46