Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2638 ATGGAAGCCCTCGTGTGTAGAAAACTAGGTGATCCAACTGTGTCTATACAAGACAATTCTAGCCCGATACTTATCTCGAGAAATCACCCTATCCCTGAATTGGATTCTCCCACTGCCGTGAGAGTGAGAATCAAAGCGACGAGCTTGAATTTTGCAAATTACTTGCAGATACTGGGAAAGTACCAAGAAAAGGCCTCTTTGCCATTCATCCCAGGCTCCGATTACTCTGGAGTCGTTGACGCAGTTGGCCCCAAAGTTTCCAATTTCAGAGTTGGAGACCCTGTTTGTTCCTTCGTTCCACTTGGGTCCTTTGCTCAATTCATCGTTGTCGATCAAGCCCAATTGTTTCGCGTACCAGAAGGTTGTGATCTGGTTGCTGCAGGCGCGCTTCCTGTGGCATTTGGCACTTCACATGTTGCACTCGTTCATAGAGCTCAATTGACCTCTGGTCAGGTATTGCTGGTTTTAGGTGCAGCAGGAGGTGTAGGCCTTGCAGCCGTGCAAATTGGAAAAGCAGTTGGTGCCGTTGTCATAGCCGTTGCTAGGGGAGCTGATAAGGTGCAGCTTTTGAAATCACTTGGTACTGATCATGTGGTGGACTTAACTTGTGAAAATGTCACTCAAAGTGTCAAAGAGTTCCTTCGATCTAGAAAGCTCAAAGGGGTTGATGTTCTGTATGATCCAGTTGGAGGCAAGCTTACCAAAGAAACCATGAAGCTTTTGAACTGGGGAGCTCACATTCTTATCATTGGATTTGCAAGTGGAGAGATCCCTGTCATCCCTGCTAATATAGCTCTTGTCAAGAATTGGACAGTGCATGGTCTGTACTGGGGTAGCTATAAAATACATCGCCCAAGTGTTCTTGAAGAGTCTGTGAGAGAGCTACTATCCTGGTTGGCAAGAGGCTTGATTTCTATCCACATATCTCACTCTTACCGGCTATCAGAGGCCAACCTTGCCTTTGCTGCTATCAGAGATAGGAAAGCTATTGGGAAGGTGATGATTGTTTTTTATGAGAAGCATACCATATCTAAGCTCTGA 1041 0.4582 MEALVCRKLGDPTVSIQDNSSPILISRNHPIPELDSPTAVRVRIKATSLNFANYLQILGKYQEKASLPFIPGSDYSGVVDAVGPKVSNFRVGDPVCSFVPLGSFAQFIVVDQAQLFRVPEGCDLVAAGALPVAFGTSHVALVHRAQLTSGQVLLVLGAAGGVGLAAVQIGKAVGAVVIAVARGADKVQLLKSLGTDHVVDLTCENVTQSVKEFLRSRKLKGVDVLYDPVGGKLTKETMKLLNWGAHILIIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPSVLEESVRELLSWLARGLISIHISHSYRLSEANLAFAAIRDRKAIGKVMIVFYEKHTISKL 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2638 346 PANTHER QUINONE OXIDOREDUCTASE-LIKE PROTEIN 2 1 336 - -
Sto9g2638 346 Pfam Alcohol dehydrogenase GroES-like domain 38 97 IPR013154 -
Sto9g2638 346 Pfam Zinc-binding dehydrogenase 161 300 IPR013149 -
Sto9g2638 346 SMART PKS_ER_names_mod 17 335 IPR020843 GO:0016491
Sto9g2638 346 Gene3D - 35 331 - -
Sto9g2638 346 CDD QOR1 1 335 - -
Sto9g2638 346 Gene3D - 133 280 - -
Sto9g2638 346 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 1 336 - -
Sto9g2638 346 SUPERFAMILY GroES-like 2 154 IPR011032 -
Sto9g2638 346 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 150 171 IPR002364 GO:0008270|GO:0016491
Sto9g2638 346 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 122 286 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2638 Sto-Chr9 28656544 28659709 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2638 65 266 Monolignol Biosynthesis Gene Families AT1G72680 25.105 5.98e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2638 K00344 - gmx:100817700 566.614