Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2622 ATGACTTCGCTAATTTCCTCTCAAAATAATGTCTCTCTGGAGAGTAATAGCATCCTCGTCTCCGAGCTCCTTCAGGGTCGTGATTCTGCTTCTCAGCTCAAGCTTTTGCTTCAAAACCCTTCTTCTCCTGATGGGCCTCACTCGGCCCAACACCTCCTCGCCAAAATTCTCAGATCTTTCACACAAACTATTTCCCTCCTCACTTCCCCCCAAGCCGCCGCTCCGAATCTGGCCATTTCCGCTGAGAATGGGTCGCCGGCGGGAGCTTCCGGCGAGAGTAGGAAGAAATCGTCGCCGGCTACCAAGGATCGGAGAGGCTGCTACAAAAGAAGGAAGACTGCGCATACATGGACCCATGTCTCCAACACTTTGGATGATAATCATGCATGGAGGAAGTACGGACAGAAGCATATCCTCAATTCTGAATACCCCAGGAGTTACTTCAGGTGCACTCGGAAAAATGAGCAAGGTTGTAAGGCAATTAAACAGGTTCAGCAGATACAAGAGAATCCAGAAAGGTTCCAAACAACGTACATTGGAACTCACACATGCAAAGACATGAACCTCAAGCCTCCCGAAGTGGTCAAAGATTTTGCAGGTAATTGGGAATCATATATCAATGTGTCCGAATCCGAATCAAAGGTACAAAACGATGAGGTGATGATGATGCATGATAATTTGATGACTTCCGGTTCATCATCATCAACCCCAAGCATAAAGCAAGAATATCATCCCAAAGAATTAGACACACCCCTAAGTGGTGTAACAGACAATAACTTGGACCCTTGTGACGACGATCTTTGGTCTGATTTAAAGGATATTGAACTTCCTCAGCCTTCAATTATGCTCTCAAACAATCATAATGCTGATGATATATACTGTGGTGTATTCATGTAG 897 0.4537 MTSLISSQNNVSLESNSILVSELLQGRDSASQLKLLLQNPSSPDGPHSAQHLLAKILRSFTQTISLLTSPQAAAPNLAISAENGSPAGASGESRKKSSPATKDRRGCYKRRKTAHTWTHVSNTLDDNHAWRKYGQKHILNSEYPRSYFRCTRKNEQGCKAIKQVQQIQENPERFQTTYIGTHTCKDMNLKPPEVVKDFAGNWESYINVSESESKVQNDEVMMMHDNLMTSGSSSSTPSIKQEYHPKELDTPLSGVTDNNLDPCDDDLWSDLKDIELPQPSIMLSNNHNADDIYCGVFM 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2622 298 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 12 288 IPR044810 GO:0003700
Sto9g2622 298 PANTHER WRKY DNA-BINDING TRANSCRIPTION FACTOR 70 12 288 - -
Sto9g2622 298 Pfam WRKY DNA -binding domain 125 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g2622 298 SUPERFAMILY WRKY DNA-binding domain 119 185 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto9g2622 298 SMART WRKY_cls 124 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g2622 298 ProSiteProfiles WRKY domain profile. 119 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g2622 298 MobiDBLite consensus disorder prediction 83 110 - -
Sto9g2622 298 Gene3D WRKY domain 109 186 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2622 Sto-Chr9 28551455 28553247 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2622 19 184 WRKY Transcription Factor Family AT3G56400 44.571 2.19e-44 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto9g2622 WRKY 1.9e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2622 - - vun:114164744 242.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2622 9 28551455 28553247 Sto9g2622 9 28551455 28553247 ECH