Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2605 ATGGGCAGTGTTAGTAATATTGGCTTCCGTTCAGTATTCAGAGCATCTCATTCTGTGGAGACTCAAGTGTTTGGGAAGCAGAGGCAGAAGAAATCGGCATGCGCTCTTATGATTCCGAGCAACACAGTTAGGTTCAAATTCAATCAAATCTATTGCAAACTTCCAGAGAGTGGGATTGAGGAGAATCCGACGAGCAGGAGGACGGCCTCTAATTCCAAGAACAGGATGGAGGACTACAATATAGCTATGAAAAGGATGATGAAGAACCCTTACGAGTATCACCACGAGCTCGGTATGAATTACACGCTCATAACTGATAATTTGATTGTGGGCTCCCAGCCACAGAAAGCTGAAGATATAGATCACCTCAAAAAGGAAGAGGATGTAGCATACATTCTAAACTTGCAACAGGATAAGGATGTGGAGTATTGGGGAATAGACTTACAATCTATAATTAAACGATGCCGCCAAGTTGGTATTCGTCACATGAGAAGGCCTGCAATAGACTTTGATCCAAACTCCTTGAGAAATGAACTACCAAAAGCAGTTTCTTCACTGGAATGGGCTATTTCAGAGGGAAAAGGAAGAGTGTATGTGCATTGCACTGCTGGACTTGGGAGAGCTCCGGCGGTGGCAATTGCTTATTTGTTCTGGTTCTGCAACATGAATctGAATGCAGCATATGATATGCTAACTGCAAAGAGACCTTGTGGACCCAATAAAAAAGCAATACGTGGAGCTACTTATGATTTGGCTAAGAATGATCCATGGAAGGAGCCATTTGAGAGCCTTCCAGAATATGCATTTGAGGATATAGCAGACTGGGAGAGGAACTTGATTCAAGATCGTGTCCGTTCTCTTCGTGGAACTTGA 873 0.4318 MGSVSNIGFRSVFRASHSVETQVFGKQRQKKSACALMIPSNTVRFKFNQIYCKLPESGIEENPTSRRTASNSKNRMEDYNIAMKRMMKNPYEYHHELGMNYTLITDNLIVGSQPQKAEDIDHLKKEEDVAYILNLQQDKDVEYWGIDLQSIIKRCRQVGIRHMRRPAIDFDPNSLRNELPKAVSSLEWAISEGKGRVYVHCTAGLGRAPAVAIAYLFWFCNMNLNAAYDMLTAKRPCGPNKKAIRGATYDLAKNDPWKEPFESLPEYAFEDIADWERNLIQDRVRSLRGT 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2605 290 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 177 236 IPR000387 GO:0016311|GO:0016791
Sto9g2605 290 Gene3D Protein tyrosine phosphatase superfamily 83 290 IPR029021 -
Sto9g2605 290 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 93 242 IPR029021 -
Sto9g2605 290 Pfam Dual specificity phosphatase, catalytic domain 121 240 IPR000340 GO:0008138|GO:0016311
Sto9g2605 290 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF2, CHLOROPLASTIC 4 290 - -
Sto9g2605 290 CDD DSP_laforin-like 99 246 IPR045204 GO:0019203|GO:0046838
Sto9g2605 290 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 4 290 - -
Sto9g2605 290 ProSiteProfiles Dual specificity protein phosphatase domain profile. 100 257 IPR020422 GO:0006470|GO:0008138
Sto9g2605 290 SMART dsp_5 100 242 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2605 Sto-Chr9 28454293 28455956 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2605 11 290 Protein tyrosine phosphatase (PTP) family AT3G10940 70.357 2.34e-147 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2605 - - gmx:100787079 465.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2605 9 28454293 28455956 Sto9g2605 9 28454293 28455956 ECH