Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g2581 TTGTATCGATCTGGGATTTTTGCTTCCGATTCTGGCTTCTTCATTGATCGTTTTTCTGGGATAGGTTGTGCAGATCATACTCATTCAGATCTAATTGTTAAGAGTGGAAATACTGTTCATTCGATTTGCTCTAATATCATCTCGCTGCCCTTGGATTCTTCTAGAAAGAGGAAAAGTCGAAGTCGGCGGGACGGTTCCAAATCTGTGGCTGAGACTTTGGCGAAGTGGAGAGAATATAATGAGCATATTGGATCTTCTAAAGTTGAGAGTAAACCAACTCGCAAAGCTCCAGCTAAGGGTTCAAAGAAAGGGTGCATGAAAGGTAAAGGGGGGCCTGACAACTCAAGATGTAACTACAGAGGCGTTAGGCAAAGAACGTGGGGAAAATGGGTTGCTGAGATTAGAGAGCCAAATAGAGGAAGTAGGCTTTGGTTGGGTACCTTCTCTACTGCTTATGAAGCTGCTCTTGCATATGATGAAGCGGCCAGAGCTATGTATGGTCCTTGTGCCCGCCTCAACTTCCCTCACATATCAGACTATACTTCTTGCAAGGAGTCACTAAAGGAATCTTCTTCAGCTACAACTTTTTCAAGTTCTTCAGTGACAACCCCTGTAAGCTCCGACACAACTACTATGTCGAACCATTCAGAGGTATGTGCAGTTGAAGATGTGAAGACGAACTTTCAACCTAACACAATAAATGAGAgggaaagagatagagataggGCTAATGTCCATCCTGATGCTGATGAAGTTGCCTCTGCAATTGTCAAAGTGAAGTCAGAGCCGAAACTTGAGCCTGTCGATGCCGATCTCCTACATCATGAGGGCAGAGATAGTCAAATTGTAAAACAAGAAGCACATGAGACTAAAAAAGATGCCAAAGATGAAAGTAAAGATCAGATGGATTATTGGCTTGGGGGTGATGTTTTTGAGGATGAGTACATGCAAAATTTCTCTATGGATGAGATGTTTCATGTGGATGAACTTTTAGGGGCGATAGATAACAATCCGATTGGTGACTCTCAAATGTTTGGGTTTGATCAAATGGACATTCCTGAGGAGGGAAATCTTAAGAGTGAGATACCGTCAAGTTTGTCCTATCAATTGCAAAATCCAGACGCGAAACTATTGGGAAGTTTGCATCATATGGAACAGACACCATCTGATGTTGATTATGGACTCGACTTCTTGAAAATGGACGAGCCAAAGGACAATAGCGGAGAGGAAGAGCAGCAATTTCTTGATTTTGGATCACTGGATCTCTGA 1269 0.4192 LYRSGIFASDSGFFIDRFSGIGCADHTHSDLIVKSGNTVHSICSNIISLPLDSSRKRKSRSRRDGSKSVAETLAKWREYNEHIGSSKVESKPTRKAPAKGSKKGCMKGKGGPDNSRCNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFSTAYEAALAYDEAARAMYGPCARLNFPHISDYTSCKESLKESSSATTFSSSSVTTPVSSDTTTMSNHSEVCAVEDVKTNFQPNTINERERDRDRANVHPDADEVASAIVKVKSEPKLEPVDADLLHHEGRDSQIVKQEAHETKKDAKDESKDQMDYWLGGDVFEDEYMQNFSMDEMFHVDELLGAIDNNPIGDSQMFGFDQMDIPEEGNLKSEIPSSLSYQLQNPDAKLLGSLHHMEQTPSDVDYGLDFLKMDEPKDNSGEEEQQFLDFGSLDL 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g2581 422 MobiDBLite consensus disorder prediction 191 213 - -
Sto9g2581 422 MobiDBLite consensus disorder prediction 84 117 - -
Sto9g2581 422 Pfam AP2 domain 117 167 IPR001471 GO:0003700|GO:0006355
Sto9g2581 422 MobiDBLite consensus disorder prediction 401 422 - -
Sto9g2581 422 Gene3D AP2/ERF domain 118 177 IPR036955 GO:0003700|GO:0006355
Sto9g2581 422 SUPERFAMILY DNA-binding domain 118 176 IPR016177 GO:0003677
Sto9g2581 422 MobiDBLite consensus disorder prediction 278 299 - -
Sto9g2581 422 PRINTS Ethylene responsive element binding protein signature 141 157 IPR001471 GO:0003700|GO:0006355
Sto9g2581 422 PRINTS Ethylene responsive element binding protein signature 119 130 IPR001471 GO:0003700|GO:0006355
Sto9g2581 422 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 51 404 - -
Sto9g2581 422 ProSiteProfiles AP2/ERF domain profile. 118 175 IPR001471 GO:0003700|GO:0006355
Sto9g2581 422 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 51 404 - -
Sto9g2581 422 CDD AP2 117 176 IPR001471 GO:0003700|GO:0006355
Sto9g2581 422 SMART rav1_2 118 181 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g2581 Sto-Chr9 28318876 28320541 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g2581 55 399 AP2-EREBP Transcription Factor Family AT2G40340 42.286 1.72e-72 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sto9g2581 AP2 3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g2581 - K09286 gmx:100800134 390.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g2581 9 28318876 28320541 Sto9g2581 9 28318876 28320541 ECH